Tableau information
Concept source: d1r30b_ amino acid (a.a.) range (ARG38)(GLY146)
nSSEs in this Concept: 6
String of secondary struct.elems. (SSEs) defining this concept: EHEHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ARG38) (LYS49) E1
(GLU77) (GLY92) H2
(ARG95) (ALA101) E3
(HIS106) (GLY124) H4
(GLU126) (GLY132) E5
(SER135) (GLY146) H6
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 161.8° H2
E3 -33.8° 143.4° E3
H4 144.2° -29.5° 163.8° H4
E5 -49.0° 131.7° -15.7° 160.0° E5
H6 120.5° -53.2° 150.3° -24.3° 163.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.3° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2du2a_ : (PRO88) (ASP164) [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Aerococcus viridans [TaxId: 1377]
d2czva_ : (ASP28) (GLY96) [view usage] : c.6.3.2 |7-stranded beta/alpha barrel |PHP domain-like |RNase P subunit p30 |Ribonuclease P protein component 3, Rnp3 |Pyrococcus horikoshii [TaxId: 53953]
d2wbka3 : (LYS358) (LEU448) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Bacteroides thetaiotaomicron [TaxId: 226186]
d1y0ea_ : (GLY5) (GLN87) [view usage] : c.1.2.5 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |NanE-like |Putative N-acetylmannosamine-6-phosphate 2-epimerase NanE |Staphylococcus aureus [TaxId: 1280]
d1fcua_ : (ASP220) (LEU333) [view usage] : c.1.8.9 |TIM beta/alpha-barrel |(Trans)glycosidases |Bee venom hyaluronidase |Bee venom hyaluronidase |Honeybee (Apis mellifera) [TaxId: 7460]
d3pb0a_ : (ILE70) (ARG149) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Thermotoga maritima [TaxId: 2336]
d4wuia_ : (ALA0) (SER73) [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Jonesia denitrificans [TaxId: 471856]
d2x8rb_ : (VAL12) (ASN89) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Aspergillus fumigatus [TaxId: 330879]
d4m0xb2 : (LYS133) (ARG208) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Rhodococcus opacus [TaxId: 37919]
d3rysa_ : (SER135) (HIS217) [view usage] : c.1.9.0 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |automated matches |automated matches |Arthrobacter aurescens [TaxId: 290340]
d2fb2a_ : (ARG14) (GLY119) [view usage] : c.1.28.3 |TIM beta/alpha-barrel |Radical SAM enzymes |MoCo biosynthesis proteins |Molybdenum cofactor biosynthesis protein A MoaA |Staphylococcus aureus [TaxId: 1280]
d2x8ra_ : (VAL12) (ASN89) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Aspergillus fumigatus [TaxId: 330879]
d3my9a2 : (ASP133) (ASP214) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Azorhizobium caulinodans [TaxId: 438753]
d2pgwa2 : (LYS135) (LEU213) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d2dxla1 : (MET1) (TYR90) [view usage] : d.159.1.11 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |GpdQ-like |Glycerophosphodiesterase GpdQ |Enterobacter aerogenes [TaxId: 548]
d2zo9b1 : (ALA4) (TYR90) [view usage] : d.159.1.11 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |GpdQ-like |Glycerophosphodiesterase GpdQ |Enterobacter aerogenes [TaxId: 548]
d1g7ua_ : (VAL20) (GLN103) [view usage] : c.1.10.4 |TIM beta/alpha-barrel |Aldolase |Class I DAHP synthetase |3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) |Escherichia coli [TaxId: 562]
d2fb2b_ : (ARG14) (GLY119) [view usage] : c.1.28.3 |TIM beta/alpha-barrel |Radical SAM enzymes |MoCo biosynthesis proteins |Molybdenum cofactor biosynthesis protein A MoaA |Staphylococcus aureus [TaxId: 1280]
d4o6za_ : (GLU149) (ASN219) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Plasmodium falciparum [TaxId: 36329]
d1hjsa_ : (ASP207) (ILE332) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Beta-1,4-galactanase |Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]
d1tv7b_ : (ARG14) (GLY119) [view usage] : c.1.28.3 |TIM beta/alpha-barrel |Radical SAM enzymes |MoCo biosynthesis proteins |Molybdenum cofactor biosynthesis protein A MoaA |Staphylococcus aureus [TaxId: 1280]
d2j6xa_ : (PRO88) (ASP164) [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Aerococcus viridans [TaxId: 1377]
d3d03a_ : (MET1) (TYR90) [view usage] : d.159.1.11 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |GpdQ-like |Glycerophosphodiesterase GpdQ |Enterobacter aerogenes [TaxId: 548]
d1r30a_ : (ARG38) (GLY146) [view usage] : c.1.28.1 |TIM beta/alpha-barrel |Radical SAM enzymes |Biotin synthase |Biotin synthase |Escherichia coli [TaxId: 562]
d2p53a2 : (GLY54) (ASN162) [view usage] : c.1.9.10 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain |N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain |Escherichia coli [TaxId: 562]
d3ro6a2 : (PRO131) (GLU209) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Methylococcus capsulatus [TaxId: 414]
d1qnoa_ : (GLY238) (CYS334) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Beta-mannanase |Trichoderma reesei [TaxId: 51453]
d1r30b_ : (ARG38) (GLY146) [view usage] : c.1.28.1 |TIM beta/alpha-barrel |Radical SAM enzymes |Biotin synthase |Biotin synthase |Escherichia coli [TaxId: 562]
d3rita2 : (ASP128) (LEU210) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Methylococcus capsulatus [TaxId: 414]
d4kema2 : (TRP148) (LEU229) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Azospirillum sp. [TaxId: 137722]
d3noeb_ : (ILE158) (GLY224) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.67, d.159, c.6