Tableau information
Concept source: d1zc3a1 amino acid (a.a.) range (GLY88)(SER183)
nSSEs in this Concept: 6
String of secondary struct.elems. (SSEs) defining this concept: EHEHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY88) (SER94) E1
(MET98) (GLU116) H2
(PRO121) (GLY126) E3
(SER138) (ASN150) H4
(VAL151) (GLU155) E5
(ASN163) (SER183) H6
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 163.9° H2
E3 -11.1° 171.3° E3
H4 156.1° -12.5° 167.2° H4
E5 -44.0° 144.9° -33.6° 157.3° E5
H6 150.0° -20.5° 160.8° -8.1° -165.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.9° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4e8ba2 : (HIS79) (ALA161) [view usage] : c.116.1.5 |alpha/beta knot |alpha/beta knot |YggJ C-terminal domain-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3eqza_ : (GLN46) (SER122) [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Colwellia psychrerythraea [TaxId: 167879]
d4o2ra_ : (GLY80) (LYS169) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2hqra1 : (ASP46) (LEU113) [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Helicobacter pylori [TaxId: 85963]
d1eyza2 : (THR13) (GLU74) [view usage] : c.30.1.1 |PreATP-grasp domain |PreATP-grasp domain |BC N-terminal domain-like |Glycinamide ribonucleotide transformylase PurT, N-domain |Escherichia coli [TaxId: 562]
d1iola_ : (VAL4) (VAL79) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Human estrogenic 17beta-hydroxysteroid dehydrogenase |Human (Homo sapiens) [TaxId: 9606]
d3l0id_ : (GLY86) (MSE176) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4phga_ : (CYS84) (GLN181) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
d3eqzb_ : (GLN46) (GLN125) [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Colwellia psychrerythraea [TaxId: 167879]
d1qo0e_ : (ASP54) (GLY161) [view usage] : c.23.1.3 |Flavodoxin-like |CheY-like |Positive regulator of the amidase operon AmiR |Positive regulator of the amidase operon AmiR |Pseudomonas aeruginosa [TaxId: 287]
d1z0ac_ : (ALA80) (TYR168) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2mmca_ : (CYS85) (LYS159) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Ran |Human (Homo sapiens) [TaxId: 9606]
d3cfya_ : (GLN48) (GLY129) [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Vibrio parahaemolyticus [TaxId: 223926]
d1xtqa1 : (GLY80) (LYS169) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |GTP-binding protein RheB |Human (Homo sapiens) [TaxId: 9606]
d3seaa_ : (GLY80) (LYS169) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |GTP-binding protein RheB |Human (Homo sapiens) [TaxId: 9606]
d4o25a_ : (GLY80) (LYS169) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3gj4a_ : (CYS85) (LYS167) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Ran |Human (Homo sapiens) [TaxId: 9606]
d1vmea1 : (GLU309) (GLU398) [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |ROO-like flavoprotein TM0755, C-terminal domain |Thermotoga maritima [TaxId: 2336]
d2l0xa_ : (ASN79) (ALA174) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |GTP-binding protein RheB |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2eqba_ : (GLY95) (SER186) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1fzra_ : (PHE63) (GLU132) [view usage] : c.52.1.17 |Restriction endonuclease-like |Restriction endonuclease-like |Endonuclease I (Holliday junction resolvase) |Endonuclease I (Holliday junction resolvase) |Bacteriophage T7 [TaxId: 10760]
d1a2kd_ : (CYS85) (GLY170) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Ran |Dog (Canis familiaris) [TaxId: 9615]
d2gkga_ : (GLY59) (LEU119) [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Myxococcus xanthus [TaxId: 34]
d4h0na_ : (LYS4) (ASN68) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Fall armyworm (Spodoptera frugiperda) [TaxId: 7108]
d1oiwa_ : (VAL85) (GLN166) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Rab11a |Human (Homo sapiens) [TaxId: 9606]
d2wwxa_ : (GLY83) (MET173) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1oixa_ : (VAL85) (GLN166) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Rab11a |Human (Homo sapiens) [TaxId: 9606]
d1a27a_ : (THR3) (ARG78) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Human estrogenic 17beta-hydroxysteroid dehydrogenase |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.2, c.66, c.23, c.37, c.116, c.52, c.30