Protein Concepts Dictionary

Tableau information

Concept source:  d4m1eb_  amino acid (a.a.) range (GLY183)(ARG272)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: EHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLY183)  (SER189) E1
	  (THR195)  (GLY206) H2
	  (ASP208)  (MSE212) E3
	  (VAL215)  (GLY225) H4
	  (VAL228)  (VAL234) E5
	  (LEU248)  (ARG272) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                        
H2      136.1°   H2                                 
E3      -28.8°  123.8°   E3                          
H4     -109.5°   29.9°   93.9°   H4                   
E5       82.4° -139.1°   96.6° -168.1°   E5            
H6     -128.2°   23.3° -106.5°  -21.9°  147.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.4°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4m1ea_ :   (VAL184)  (ALA274)   [view usage] : c.56.2.0 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |automated matches |automated matches |Planctomyces limnophilus [TaxId: 521674]
 d1tcuc_ :   (VAL193)  (LYS283)   [view usage] : c.56.2.0 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |automated matches |automated matches |Blood fluke (Schistosoma mansoni) [TaxId: 6183]
 d4m1eb_ :   (GLY183)  (ARG272)   [view usage] : c.56.2.0 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |automated matches |automated matches |Planctomyces limnophilus [TaxId: 521674]
 d1a9xb1 :  (GLN1578) (PHE1650)   [view usage] : c.8.3.1 |The "swivelling" beta/beta/alpha domain |Carbamoyl phosphate synthetase, small subunit N-terminal domain |Carbamoyl phosphate synthetase, small subunit N-terminal domain |Carbamoyl phosphate synthetase, small subunit N-terminal domain |Escherichia coli [TaxId: 562]
 d4m1ee_ :   (GLY183)  (ILE273)   [view usage] : c.56.2.0 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |automated matches |automated matches |Planctomyces limnophilus [TaxId: 521674]
 d1ulaa_ :   (THR191)  (ILE282)   [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |Purine nucleoside phosphorylase, PNP |Human (Homo sapiens) [TaxId: 9606]
 d4glfa_ :   (ALA169)  (SER262)   [view usage] : c.56.2.0 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |automated matches |automated matches |Uncultured bacterium [TaxId: 77133]
 d1m73e_ :   (GLU186)  (ILE282)   [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |Purine nucleoside phosphorylase, PNP |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.56,     c.8