Protein Concepts Dictionary

Tableau information

Concept source:  d3rtla_  amino acid (a.a.) range (ASP344)(VAL397)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: EHEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASP344)  (GLU354) E1
	  (SER361)  (VAL367) H2
	  (PRO370)  (LEU376) E3
	  (MET382)  (ASN388) E4
	  (ASN388)  (LYS393) H5
	  (LYS393)  (VAL397) E6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                        
H2     -146.3°   H2                                 
E3      128.3°   71.6°   E3                          
E4      -59.5°   86.8°  124.8°   E4                   
H5       58.2° -142.9°  -73.1°  104.1°   H5            
E6      108.1° -103.6°  -74.0°  161.0°   77.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3rurb_ :   (ASP344)  (GLU398)   [view usage] : b.1.28.0 |Immunoglobulin-like beta-sandwich |NEAT domain-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 158879]
 d3rtld_ :   (ASP344)  (GLU398)   [view usage] : b.1.28.0 |Immunoglobulin-like beta-sandwich |NEAT domain-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 158879]
 d3qzoc_ :    (ILE69)  (ASN120)   [view usage] : b.1.28.1 |Immunoglobulin-like beta-sandwich |NEAT domain-like |NEAT domain |automated matches |Staphylococcus aureus [TaxId: 158879]
 d3rurc_ :   (ASP344)  (VAL397)   [view usage] : b.1.28.0 |Immunoglobulin-like beta-sandwich |NEAT domain-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 158879]
 d3rtla_ :   (ASP344)  (VAL397)   [view usage] : b.1.28.0 |Immunoglobulin-like beta-sandwich |NEAT domain-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 158879]
 d3vuab_ :   (ALA550)  (VAL599)   [view usage] : b.1.28.0 |Immunoglobulin-like beta-sandwich |NEAT domain-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 158879]
 d3qzna_ :    (THR65)  (ASN120)   [view usage] : b.1.28.1 |Immunoglobulin-like beta-sandwich |NEAT domain-like |NEAT domain |automated matches |Staphylococcus aureus [TaxId: 158879]
 d3rurd_ :   (ASP344)  (VAL397)   [view usage] : b.1.28.0 |Immunoglobulin-like beta-sandwich |NEAT domain-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 158879]
 d3vuaa_ :   (ALA550)  (GLU600)   [view usage] : b.1.28.0 |Immunoglobulin-like beta-sandwich |NEAT domain-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 158879]
 d2e7db_ :    (ALA17)   (VAL66)   [view usage] : b.1.28.0 |Immunoglobulin-like beta-sandwich |NEAT domain-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 158879]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   b.1