Tableau information
Concept source: d4ojha_ amino acid (a.a.) range (LYS14)(PHE88)
nSSEs in this Concept: 6
String of secondary struct.elems. (SSEs) defining this concept: EHEEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS14) (GLY22) E1
(PHE29) (LEU40) H2
(LYS43) (LEU49) E3
(GLY52) (ALA58) E4
(GLU62) (GLN74) H5
(GLU82) (PHE88) E6
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 157.2° H2
E3 -26.4° 170.0° E3
E4 166.1° -9.3° 166.8° E4
H5 -2.1° 157.7° -26.8° 166.1° H5
E6 164.7° -37.5° 138.3° -29.1° 164.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.2° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1fd8a_ : (MET1) (GLN72) [view usage] : d.58.17.1 |Ferredoxin-like |HMA, heavy metal-associated domain |HMA, heavy metal-associated domain |ATX1 metallochaperone protein (ATOX1) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1apsa_ : (PRO5) (PHE80) [view usage] : d.58.10.1 |Ferredoxin-like |Acylphosphatase/BLUF domain-like |Acylphosphatase-like |Acylphosphatase |Horse (Equus caballus) [TaxId: 9796]
d1vbka2 : (VAL3) (PRO76) [view usage] : d.308.1.1 |THUMP domain |THUMP domain-like |THUMP domain |Hypothetical protein PH1313, N-terminal domain |Pyrococcus horikoshii [TaxId: 53953]
d1kvia_ : (ASN8) (ASN77) [view usage] : d.58.17.1 |Ferredoxin-like |HMA, heavy metal-associated domain |HMA, heavy metal-associated domain |Menkes copper-transporting ATPase |Human (Homo sapiens) [TaxId: 9606]
d2vh7a_ : (THR5) (ASN82) [view usage] : d.58.10.1 |Ferredoxin-like |Acylphosphatase/BLUF domain-like |Acylphosphatase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3tnva_ : (ALA2) (TRP78) [view usage] : d.58.10.1 |Ferredoxin-like |Acylphosphatase/BLUF domain-like |Acylphosphatase-like |automated matches |Pyrococcus horikoshii [TaxId: 70601]
d1tdja2 : (ARG337) (VAL407) [view usage] : d.58.18.2 |Ferredoxin-like |ACT-like |Allosteric threonine deaminase C-terminal domain |Allosteric threonine deaminase C-terminal domain |Escherichia coli [TaxId: 562]
d2w4ca_ : (ASN4) (ASN82) [view usage] : d.58.10.1 |Ferredoxin-like |Acylphosphatase/BLUF domain-like |Acylphosphatase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1m0sa2 : (LEU132) (ILE198) [view usage] : d.58.40.1 |Ferredoxin-like |D-ribose-5-phosphate isomerase (RpiA), lid domain |D-ribose-5-phosphate isomerase (RpiA), lid domain |D-ribose-5-phosphate isomerase (RpiA), lid domain |Haemophilus influenzae [TaxId: 727]
d4es1a1 : (LEU2) (ARG70) [view usage] : d.58.58.0 |Ferredoxin-like |TTP0101/SSO1404-like |automated matches |automated matches |Bacillus halodurans [TaxId: 272558]
d1gxua_ : (VAL9) (PRO78) [view usage] : d.58.10.1 |Ferredoxin-like |Acylphosphatase/BLUF domain-like |Acylphosphatase-like |Hydrogenase maturation protein HypF N-terminal domain (HypF-ACP) |Escherichia coli [TaxId: 562]
d3znj1_ : (MET1) (PRO83) [view usage] : d.58.4.0 |Ferredoxin-like |Dimeric alpha+beta barrel |automated matches |automated matches |Rhodococcus opacus [TaxId: 37919]
d2bj7a2 : (GLY56) (SER132) [view usage] : d.58.18.4 |Ferredoxin-like |ACT-like |Nickel responsive regulator NikR, C-terminal domain |Nickel responsive regulator NikR, C-terminal domain |Pyrococcus horikoshii [TaxId: 53953]
d2nzcb_ : (ARG4) (PRO79) [view usage] : d.58.18.14 |Ferredoxin-like |ACT-like |TM1266-like |automated matches |Thermotoga maritima [TaxId: 243274]
d1ri7a2 : (ALA89) (ILE157) [view usage] : d.58.4.2 |Ferredoxin-like |Dimeric alpha+beta barrel |Lrp/AsnC-like transcriptional regulator C-terminal domain |Putative transcriptional regulator PH1519 |Pyrococcus horikoshii [TaxId: 53953]
d1q5yc_ : (GLY52) (PRO130) [view usage] : d.58.18.4 |Ferredoxin-like |ACT-like |Nickel responsive regulator NikR, C-terminal domain |Nickel responsive regulator NikR, C-terminal domain |Escherichia coli [TaxId: 562]
d2acya_ : (THR5) (ASN82) [view usage] : d.58.10.1 |Ferredoxin-like |Acylphosphatase/BLUF domain-like |Acylphosphatase-like |Acylphosphatase |Cow (Bos taurus) [TaxId: 9913]
d2cyya2 : (ALA69) (ILE137) [view usage] : d.58.4.2 |Ferredoxin-like |Dimeric alpha+beta barrel |Lrp/AsnC-like transcriptional regulator C-terminal domain |automated matches |Pyrococcus horikoshii [TaxId: 53953]
d2efqa2 : (ASP62) (VAL136) [view usage] : d.58.4.0 |Ferredoxin-like |Dimeric alpha+beta barrel |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 273063]
d3toqa_ : (ALA10) (VAL86) [view usage] : d.58.10.1 |Ferredoxin-like |Acylphosphatase/BLUF domain-like |Acylphosphatase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1v3za_ : (ALA2) (TRP78) [view usage] : d.58.10.1 |Ferredoxin-like |Acylphosphatase/BLUF domain-like |Acylphosphatase-like |Acylphosphatase |Pyrococcus horikoshii [TaxId: 53953]
d4ojga_ : (MET12) (SER89) [view usage] : d.58.10.0 |Ferredoxin-like |Acylphosphatase/BLUF domain-like |automated matches |automated matches |Sulfolobus solfataricus [TaxId: 2287]
d1nh8a2 : (GLN211) (ARG280) [view usage] : d.58.5.3 |Ferredoxin-like |GlnB-like |ATP phosphoribosyltransferase (ATP-PRTase, HisG), regulatory C-terminal domain |ATP phosphoribosyltransferase (ATP-PRTase, HisG), regulatory C-terminal domain |Mycobacterium tuberculosis [TaxId: 1773]
d3zo7d_ : (MET1) (GLU82) [view usage] : d.58.4.0 |Ferredoxin-like |Dimeric alpha+beta barrel |automated matches |automated matches |Rhodococcus opacus [TaxId: 37919]
d1ha1a2 : (LYS104) (LYS178) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Nuclear ribonucleoprotein A1 (RNP A1, UP1) |Human (Homo sapiens) [TaxId: 9606]
d2bj3b2 : (GLY56) (THR133) [view usage] : d.58.18.4 |Ferredoxin-like |ACT-like |Nickel responsive regulator NikR, C-terminal domain |Nickel responsive regulator NikR, C-terminal domain |Pyrococcus horikoshii [TaxId: 53953]
d2bj1a2 : (GLU52) (SER132) [view usage] : d.58.18.4 |Ferredoxin-like |ACT-like |Nickel responsive regulator NikR, C-terminal domain |Nickel responsive regulator NikR, C-terminal domain |Pyrococcus horikoshii [TaxId: 53953]
d2cz4a1 : (LEU6) (GLU89) [view usage] : d.58.5.1 |Ferredoxin-like |GlnB-like |Prokaryotic signal transducing protein |Hypothetical protein TTHA0516 |Thermus thermophilus [TaxId: 274]
d2efoa2 : (ASP62) (VAL136) [view usage] : d.58.4.0 |Ferredoxin-like |Dimeric alpha+beta barrel |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 273063]
d2bvfa2 : (GLY212) (VAL290) [view usage] : d.58.32.5 |Ferredoxin-like |FAD-linked oxidases, C-terminal domain |6-hydroxy-d-nicotine oxidase |6-hydroxy-d-nicotine oxidase |Arthrobacter nicotinovorans [TaxId: 29320]
d2bj9a2 : (ALA55) (SER132) [view usage] : d.58.18.4 |Ferredoxin-like |ACT-like |Nickel responsive regulator NikR, C-terminal domain |automated matches |Pyrococcus horikoshii [TaxId: 70601]
d2pmha2 : (ASP62) (VAL136) [view usage] : d.58.4.0 |Ferredoxin-like |Dimeric alpha+beta barrel |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 273063]
d4ojha_ : (LYS14) (PHE88) [view usage] : d.58.10.0 |Ferredoxin-like |Acylphosphatase/BLUF domain-like |automated matches |automated matches |Sulfolobus solfataricus [TaxId: 2287]
d1iuja_ : (MET1) (PHE95) [view usage] : d.58.4.5 |Ferredoxin-like |Dimeric alpha+beta barrel |PG130-like |Hypothetical protein TT1380 |Thermus thermophilus [TaxId: 274]
d1up1a2 : (LYS105) (LYS179) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Nuclear ribonucleoprotein A1 (RNP A1, UP1) |Human (Homo sapiens) [TaxId: 9606]
d1q5ya_ : (GLY52) (LEU129) [view usage] : d.58.18.4 |Ferredoxin-like |ACT-like |Nickel responsive regulator NikR, C-terminal domain |Nickel responsive regulator NikR, C-terminal domain |Escherichia coli [TaxId: 562]
d3znjy_ : (MET1) (GLU82) [view usage] : d.58.4.0 |Ferredoxin-like |Dimeric alpha+beta barrel |automated matches |automated matches |Rhodococcus opacus [TaxId: 37919]
d2w4da_ : (ALA2) (TRP78) [view usage] : d.58.10.1 |Ferredoxin-like |Acylphosphatase/BLUF domain-like |Acylphosphatase-like |automated matches |Pyrococcus horikoshii [TaxId: 53953]
d1y9oa_ : (GLU11) (PHE88) [view usage] : d.58.10.0 |Ferredoxin-like |Acylphosphatase/BLUF domain-like |automated matches |automated matches |Sulfolobus solfataricus [TaxId: 2287]
d3j3az4 : (GLU742) (PHE814) [view usage] : d.58.11.1 |Ferredoxin-like |EF-G C-terminal domain-like |EF-G/eEF-2 domains III and V |Elongation factor 2 (eEF-2) |Homo sapiens [TaxId: 9606]
d3od2a2 : (GLY52) (PRO130) [view usage] : d.58.18.4 |Ferredoxin-like |ACT-like |Nickel responsive regulator NikR, C-terminal domain |Nickel responsive regulator NikR, C-terminal domain |Escherichia coli [TaxId: 562]
d2k7ka_ : (VAL10) (ASN83) [view usage] : d.58.10.1 |Ferredoxin-like |Acylphosphatase/BLUF domain-like |Acylphosphatase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2wbma3 : (GLU163) (LEU230) [view usage] : d.58.11.0 |Ferredoxin-like |EF-G C-terminal domain-like |automated matches |automated matches |Methanothermobacter thermautotrophicus [TaxId: 187420]
d2nzca1 : (ARG4) (PRO79) [view usage] : d.58.18.14 |Ferredoxin-like |ACT-like |TM1266-like |Hypothetical protein TM1266 |Thermotoga maritima [TaxId: 2336]
d3zo7a_ : (MET1) (GLU82) [view usage] : d.58.4.0 |Ferredoxin-like |Dimeric alpha+beta barrel |automated matches |automated matches |Rhodococcus opacus [TaxId: 37919]
d2hzaa2 : (GLY52) (PRO130) [view usage] : d.58.18.4 |Ferredoxin-like |ACT-like |Nickel responsive regulator NikR, C-terminal domain |Nickel responsive regulator NikR, C-terminal domain |Escherichia coli [TaxId: 562]
d1s7ha_ : (GLU114) (ASN190) [view usage] : d.58.48.2 |Ferredoxin-like |MTH1187/YkoF-like |Putative thiamin/HMP-binding protein YkoF |Putative thiamin/HMP-binding protein YkoF |Bacillus subtilis [TaxId: 1423]
d2w4pa_ : (THR5) (ASN82) [view usage] : d.58.10.1 |Ferredoxin-like |Acylphosphatase/BLUF domain-like |Acylphosphatase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2f06a2 : (ALA3) (ASP70) [view usage] : d.58.18.11 |Ferredoxin-like |ACT-like |BT0572-like |Hypothetical protein BT0572 |Bacteroides thetaiotaomicron [TaxId: 818]
d2p5va2 : (GLY67) (PHE141) [view usage] : d.58.4.0 |Ferredoxin-like |Dimeric alpha+beta barrel |automated matches |automated matches |Neisseria meningitidis [TaxId: 122586]
d2gcfa_ : (ALA2) (GLN73) [view usage] : d.58.17.0 |Ferredoxin-like |HMA, heavy metal-associated domain |automated matches |automated matches |Synechocystis sp. [TaxId: 1148]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.58, d.308