Protein Concepts Dictionary

Tableau information

Concept source:  d3k7ri_  amino acid (a.a.) range (HIS6)(LEU73)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: EHEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (HIS6)   (ASN10) E1
	   (CYS15)   (GLU30) H2
	   (SER34)   (SER39) E3
	   (GLN43)   (TYR48) E4
	   (PRO52)   (LYS62) H5
	   (SER69)   (LEU73) E6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                        
H2      155.0°   H2                                 
E3      -28.6°  171.0°   E3                          
E4      166.1°  -11.3°  164.5°   E4                   
H5      -35.2°  139.5°  -49.3°  142.5°   H5            
E6      157.1°  -47.8°  128.8°  -36.7°  139.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.7°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3cjka_ :     (PRO2)   (GLY66)   [view usage] : d.58.17.1 |Ferredoxin-like |HMA, heavy metal-associated domain |HMA, heavy metal-associated domain |ATX1 metallochaperone protein (ATOX1) |Human (Homo sapiens), HAH1 [TaxId: 9606]
 d3k7rh_ :     (LYS5)   (LEU73)   [view usage] : d.58.17.1 |Ferredoxin-like |HMA, heavy metal-associated domain |HMA, heavy metal-associated domain |ATX1 metallochaperone protein (ATOX1) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1feeb_ :     (PRO2)   (GLY66)   [view usage] : d.58.17.1 |Ferredoxin-like |HMA, heavy metal-associated domain |HMA, heavy metal-associated domain |ATX1 metallochaperone protein (ATOX1) |Human (Homo sapiens), HAH1 [TaxId: 9606]
 d1fe0b_ :     (PRO2)   (GLY66)   [view usage] : d.58.17.1 |Ferredoxin-like |HMA, heavy metal-associated domain |HMA, heavy metal-associated domain |ATX1 metallochaperone protein (ATOX1) |Human (Homo sapiens), HAH1 [TaxId: 9606]
 d3k7ra_ :     (LYS5)   (GLN72)   [view usage] : d.58.17.1 |Ferredoxin-like |HMA, heavy metal-associated domain |HMA, heavy metal-associated domain |ATX1 metallochaperone protein (ATOX1) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d2lq9a_ :     (PRO2)   (GLY66)   [view usage] : d.58.17.1 |Ferredoxin-like |HMA, heavy metal-associated domain |HMA, heavy metal-associated domain |ATX1 metallochaperone protein (ATOX1) |Human (Homo sapiens), HAH1 [TaxId: 9606]
 d2idva_ :   (ASN115)  (VAL198)   [view usage] : d.86.1.0 |eIF4e-like |eIF4e-like |automated matches |automated matches |Wheat (Triticum aestivum) [TaxId: 4565]
 d3hx9b_ :     (PRO2)   (GLU91)   [view usage] : d.58.4.0 |Ferredoxin-like |Dimeric alpha+beta barrel |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d3cjkb_ :     (ASN4)   (ARG77)   [view usage] : d.58.17.1 |Ferredoxin-like |HMA, heavy metal-associated domain |HMA, heavy metal-associated domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1ztpc_ :   (SER126)  (PRO205)   [view usage] : d.86.1.2 |eIF4e-like |eIF4e-like |BLES03-like |Basophilic leukemia expressed protein BLES03 |Human (Homo sapiens) [TaxId: 9606]
 d1ztpb_ :   (HIS123)  (PRO205)   [view usage] : d.86.1.2 |eIF4e-like |eIF4e-like |BLES03-like |Basophilic leukemia expressed protein BLES03 |Human (Homo sapiens) [TaxId: 9606]
 d1feea_ :     (PRO2)   (GLY66)   [view usage] : d.58.17.1 |Ferredoxin-like |HMA, heavy metal-associated domain |HMA, heavy metal-associated domain |ATX1 metallochaperone protein (ATOX1) |Human (Homo sapiens), HAH1 [TaxId: 9606]
 d2mjua2 :   (ALA455)  (PHE526)   [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1fe0a_ :     (PRO2)   (GLY66)   [view usage] : d.58.17.1 |Ferredoxin-like |HMA, heavy metal-associated domain |HMA, heavy metal-associated domain |ATX1 metallochaperone protein (ATOX1) |Human (Homo sapiens), HAH1 [TaxId: 9606]
 d3k7ri_ :     (HIS6)   (LEU73)   [view usage] : d.58.17.1 |Ferredoxin-like |HMA, heavy metal-associated domain |HMA, heavy metal-associated domain |ATX1 metallochaperone protein (ATOX1) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1wkia_ :    (ASP31)  (ILE131)   [view usage] : d.41.4.2 |alpha/beta-Hammerhead |Ribosomal protein L16p/L10e |Ribosomal protein L16p |Ribosomal protein L16p |Thermotoga maritima [TaxId: 2336]
 d2idra_ :   (ASN115)  (VAL198)   [view usage] : d.86.1.0 |eIF4e-like |eIF4e-like |automated matches |automated matches |Wheat (Triticum aestivum) [TaxId: 4565]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.58,    d.41,    d.86