Protein Concepts Dictionary

Tableau information

Concept source:  d1ffsb_  amino acid (a.a.) range (ALA159)(GLU224)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: EHEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ALA159)  (SER165) E1
	  (VAL172)  (THR183) H2
	  (ASP187)  (ALA192) E3
	  (ASP193)  (ILE198) E4
	  (GLU205)  (VAL215) H5
	  (GLN220)  (GLU224) E6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                        
H2      150.9°   H2                                 
E3       -4.2°  154.4°   E3                          
E4      174.0°  -23.6°  175.0°   E4                   
H5      -17.8°  144.1°  -20.8°  162.7°   H5            
E6      160.1°  -48.1°  155.9°  -24.5°  161.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.0°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2j0wa2 :   (THR309)  (GLU384)   [view usage] : d.58.18.10 |Ferredoxin-like |ACT-like |Aspartokinase allosteric domain-like |Aspartokinase |Escherichia coli [TaxId: 562]
 d1qjha_ :     (TYR4)   (LYS92)   [view usage] : d.58.14.1 |Ferredoxin-like |Ribosomal protein S6 |Ribosomal protein S6 |Ribosomal protein S6 |Thermus thermophilus [TaxId: 274]
 d2wvdb2 :    (SER63)  (LYS140)   [view usage] : d.58.18.0 |Ferredoxin-like |ACT-like |automated matches |automated matches |Helicobacter pylori [TaxId: 85962]
 d3zo7b_ :     (MET1)   (HIS86)   [view usage] : d.58.4.0 |Ferredoxin-like |Dimeric alpha+beta barrel |automated matches |automated matches |Rhodococcus opacus [TaxId: 37919]
 d1ygya3 :   (ILE455)  (SER529)   [view usage] : d.58.18.1 |Ferredoxin-like |ACT-like |Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain |Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain |Mycobacterium tuberculosis [TaxId: 1773]
 d1g1xa_ :     (TYR4)   (VAL91)   [view usage] : d.58.14.1 |Ferredoxin-like |Ribosomal protein S6 |Ribosomal protein S6 |Ribosomal protein S6 |Thermus thermophilus [TaxId: 274]
 d3bgop_ :    (TYR12)   (GLU70)   [view usage] : d.58.3.2 |Ferredoxin-like |Protease propeptides/inhibitors |Subtilase propeptides/inhibitors |automated matches |Bacillus amyloliquefaciens [TaxId: 1390]
 d2f06b2 :     (ALA3)   (ASP70)   [view usage] : d.58.18.11 |Ferredoxin-like |ACT-like |BT0572-like |Hypothetical protein BT0572 |Bacteroides thetaiotaomicron [TaxId: 818]
 d1ffsb_ :   (ALA159)  (GLU224)   [view usage] : d.58.24.1 |Ferredoxin-like |CheY-binding domain of CheA |CheY-binding domain of CheA |CheY-binding domain of CheA |Escherichia coli [TaxId: 562]
 d1a0od_ :   (ARG160)  (THR225)   [view usage] : d.58.24.1 |Ferredoxin-like |CheY-binding domain of CheA |CheY-binding domain of CheA |CheY-binding domain of CheA |Escherichia coli [TaxId: 562]
 d1fjgf_ :     (TYR4)   (LYS92)   [view usage] : d.58.14.1 |Ferredoxin-like |Ribosomal protein S6 |Ribosomal protein S6 |Ribosomal protein S6 |Thermus thermophilus [TaxId: 274]
 d1lk5a2 :   (LYS133)  (ILE208)   [view usage] : d.58.40.1 |Ferredoxin-like |D-ribose-5-phosphate isomerase (RpiA), lid domain |D-ribose-5-phosphate isomerase (RpiA), lid domain |D-ribose-5-phosphate isomerase (RpiA), lid domain |Pyrococcus horikoshii [TaxId: 53953]
 d1n0vc5 :   (GLU726)  (PHE798)   [view usage] : d.58.11.1 |Ferredoxin-like |EF-G C-terminal domain-like |EF-G/eEF-2 domains III and V |Elongation factor 2 (eEF-2) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1a0of_ :   (PRO159)  (THR225)   [view usage] : d.58.24.1 |Ferredoxin-like |CheY-binding domain of CheA |CheY-binding domain of CheA |CheY-binding domain of CheA |Escherichia coli [TaxId: 562]
 d2p9ca3 :   (ARG338)  (TYR410)   [view usage] : d.58.18.1 |Ferredoxin-like |ACT-like |Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain |Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain |Escherichia coli [TaxId: 562]
 d1ffgb_ :   (PRO159)  (GLU224)   [view usage] : d.58.24.1 |Ferredoxin-like |CheY-binding domain of CheA |CheY-binding domain of CheA |CheY-binding domain of CheA |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.58