Tableau information
Concept source: d2fhob_ amino acid (a.a.) range (ARG19)(TYR91)
nSSEs in this Concept: 6
String of secondary struct.elems. (SSEs) defining this concept: EHEEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ARG19) (ASN25) E1
(ALA32) (GLY43) H2
(GLN47) (THR53) E3
(ALA60) (GLU65) E4
(ILE67) (SER78) H5
(ARG85) (TYR91) E6
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 131.2° H2
E3 -37.7° 141.0° E3
E4 154.7° -41.2° 167.3° E4
H5 22.2° 109.1° -52.2° 140.0° H5
E6 149.4° -60.4° 113.2° -55.1° -145.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.2° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1h2ux_ : (CYS40) (TRP115) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |CBP20, 20KDa nuclear cap-binding protein |Human (Homo sapiens) [TaxId: 9606]
d3uwta2 : (ASN226) (LYS301) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4fxvd_ : (THR20) (TYR95) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2fhob_ : (ARG19) (TYR91) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3ulha_ : (GLY106) (SER183) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1fxla2 : (ALA125) (PHE202) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Hu antigen D (Hud) |Human (Homo sapiens) [TaxId: 9606]
d4f25a_ : (GLY99) (ARG172) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2cpfa1 : (LEU362) (ILE438) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Probable RNA-binding protein 19, Rbm19 |Mouse (Mus musculus) [TaxId: 10090]
d1kooc2 : (PHE120) (SER193) [view usage] : d.58.7.2 |Ferredoxin-like |RNA-binding domain, RBD |Non-canonical RBD domain |mRNA export factor tap |Human (Homo sapiens) [TaxId: 9606]
d2diva_ : (ALA10) (TYR90) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1whwa_ : (LEU40) (PRO113) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Probable RNA-binding protein 19, Rbm19 |Mouse (Mus musculus) [TaxId: 10090]
d3hi9d_ : (THR20) (TYR95) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2ywka_ : (THR11) (GLY84) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2cqca1 : (CYS119) (VAL191) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Arginine/serine-rich splicing factor 10 |Human (Homo sapiens) [TaxId: 9606]
d3bs9a_ : (PHE95) (TRP170) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1h2vz_ : (CYS40) (TRP115) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |CBP20, 20KDa nuclear cap-binding protein |Human (Homo sapiens) [TaxId: 9606]
d3md1a_ : (PHE162) (TRP237) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3lpya_ : (ARG6) (LEU81) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2voda2 : (VAL113) (PHE184) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Lupus LA protein |Human (Homo sapiens) [TaxId: 9606]
d1b7fa1 : (THR125) (TYR200) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Sex-lethal protein |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1x4ga1 : (CYS26) (TRP95) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Nucleolysin TIAR |Human (Homo sapiens) [TaxId: 9606]
d2cqpa1 : (THR926) (LEU1001) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |RNA-binding protein 12 |Mouse (Mus musculus) [TaxId: 10090]
d1h2uy_ : (CYS40) (TRP115) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |CBP20, 20KDa nuclear cap-binding protein |Human (Homo sapiens) [TaxId: 9606]
d3md1b_ : (PHE162) (TRP237) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1n54b_ : (CYS40) (TRP115) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |CBP20, 20KDa nuclear cap-binding protein |Human (Homo sapiens) [TaxId: 9606]
d2hyib_ : (TRP73) (TRP148) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |RNA-binding protein 8 |Human (Homo sapiens) [TaxId: 9606]
d1fhta_ : (HIS9) (TYR85) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Splicesomal U1A protein |Human (Homo sapiens) [TaxId: 9606]
d3lqvb_ : (ARG19) (TYR91) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2go9a1 : (THR5) (SER76) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |U4/U6 snRNA-associated-splicing factor PRP24 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3mump_ : (THR11) (GLN85) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Splicesomal U1A protein |Human (Homo sapiens) [TaxId: 9606]
d3p5tq_ : (ALA82) (PRO158) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1n52b_ : (CYS40) (TRP115) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |CBP20, 20KDa nuclear cap-binding protein |Human (Homo sapiens) [TaxId: 9606]
d3md3a2 : (PHE162) (TRP237) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2fc9a_ : (LYS16) (LEU87) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3lqva_ : (ARG19) (TYR91) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2dnma_ : (ILE14) (GLN88) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1p27b_ : (TRP73) (TRP148) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |RNA-binding protein 8 |Human (Homo sapiens) [TaxId: 9606]
d4fxvb_ : (THR20) (TYR95) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4ed5a2 : (ALA106) (PHE183) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4fxva_ : (THR20) (TYR95) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1wg1a_ : (SER95) (LEU163) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Probable RNA-binding protein KIAA1579 |Human (Homo sapiens) [TaxId: 9606]
d1h2tz_ : (CYS40) (TRP115) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |CBP20, 20KDa nuclear cap-binding protein |Human (Homo sapiens) [TaxId: 9606]
d2cq0a1 : (ALA239) (TRP314) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Eukaryotic translation initiation factor 3 subunit 4 |Human (Homo sapiens) [TaxId: 9606]
d3b4md_ : (SER173) (PRO246) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2ghpb1 : (CYS117) (VAL192) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |U4/U6 snRNA-associated-splicing factor PRP24 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3hi9b_ : (THR20) (TYR95) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2dnpa_ : (TRP79) (LEU146) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2j0qd1 : (TRP73) (TRP148) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |RNA-binding protein 8 |Human (Homo sapiens) [TaxId: 9606]
d1fxla1 : (THR39) (TYR114) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Hu antigen D (Hud) |Human (Homo sapiens) [TaxId: 9606]
d3k0jc_ : (HIS410) (TYR486) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2f9da1 : (ARG19) (TYR91) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Pre-mRNA branch site protein p14 |Human (Homo sapiens) [TaxId: 9606]
d4a8xa_ : (THR161) (ALA237) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.58