Tableau information
Concept source: d2kxfa2 amino acid (a.a.) range (ASN209)(LYS284)
nSSEs in this Concept: 6
String of secondary struct.elems. (SSEs) defining this concept: EHEEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASN209) (SER215) E1
(SER221) (GLY233) H2
(SER237) (ALA241) E3
(GLY253) (GLU258) E4
(LYS259) (SER269) H5
(GLN278) (LYS284) E6
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 122.8° H2
E3 -37.9° 135.7° E3
E4 155.5° -43.0° 165.8° E4
H5 19.2° 104.4° -46.2° 143.4° H5
E6 152.7° -63.0° 117.1° -48.6° -143.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1wg5a_ : (GLY16) (LYS90) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Heterogeneous nuclear ribonucleoprotein H' |Human (Homo sapiens) [TaxId: 9606]
d1sxla_ : (THR14) (LEU91) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Sex-lethal protein |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d3h2ve_ : (ARG59) (LEU127) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2cpda1 : (MET227) (LEU300) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |APOBEC1 stimulating protein |Human (Homo sapiens) [TaxId: 9606]
d2dnqa_ : (VAL2) (ALA69) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2vopa2 : (ARG111) (PHE184) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Lupus LA protein |Human (Homo sapiens) [TaxId: 9606]
d2dh9a_ : (SER535) (ILE611) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2dnka_ : (ARG151) (PHE228) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2ek1a_ : (THR876) (GLY951) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1x5ta1 : (ILE8) (TYR82) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Splicing factor 3B subunit 4 |Human (Homo sapiens) [TaxId: 9606]
d2la6a_ : (ASN14) (PHE97) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2dnna_ : (TYR235) (PRO306) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |RNA-binding protein 12 |Human (Homo sapiens) [TaxId: 9606]
d1cvjg2 : (GLY99) (ARG172) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Poly(A)-binding protein |Human (Homo sapiens) [TaxId: 9606]
d2kxfa2 : (ASN209) (LYS284) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ha1a1 : (LYS14) (ARG87) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Nuclear ribonucleoprotein A1 (RNP A1, UP1) |Human (Homo sapiens) [TaxId: 9606]
d2km8c1 : (CYS159) (ARG232) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4uqta_ : (TYR32) (HIS106) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2lyva1 : (ARG14) (ARG88) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3p5tm_ : (ILE81) (PRO158) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1u2fa_ : (ARG2) (ARG81) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Splicing factor U2AF 65 KDa subunit |Human (Homo sapiens) [TaxId: 9606]
d1fjca_ : (ARG17) (GLY89) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Nucleolin |Golden hamster (Mesocricetus auratus) [TaxId: 10036]
d2lcwa_ : (ASN285) (PHE368) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2dhga_ : (SER92) (VAL172) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1u6fa1 : (ASN44) (LEU118) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |RNA-binding protein UBP1 |Trypanosoma cruzi [TaxId: 5693]
d2dnoa_ : (ARG71) (PHE148) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4ch0s_ : (THR35) (LEU109) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |automated matches |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d2erra1 : (LYS117) (ASN190) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Ataxin-2-binding protein 1 |Human (Homo sapiens) [TaxId: 9606]
d1wi8a_ : (TYR96) (VAL170) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Eukaryotic translation initiation factor 4B |Human (Homo sapiens) [TaxId: 9606]
d2d9pa_ : (VAL294) (ALA366) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1wexa_ : (PRO16) (TYR87) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Heterogeneous nuclear ribonucleoprotein L-like |Mouse (Mus musculus) [TaxId: 10090]
d3h2vf_ : (ARG59) (LEU127) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2hgma_ : (GLY111) (LYS185) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1x4aa1 : (CYS23) (PHE95) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Splicing factor, arginine/serine-rich 1, SFRS1 |Human (Homo sapiens) [TaxId: 9606]
d2fc8a_ : (LYS16) (TRP88) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2x1aa_ : (ARG18) (TYR93) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2cpja1 : (SER73) (PHE142) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Non-POU domain-containing octamer-binding protein, NonO |Mouse (Mus musculus) [TaxId: 10090]
d2la4a_ : (THR341) (TRP410) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1p1ta_ : (ARG16) (ASN91) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Cleavage stimulation factor, 64 kda subunit |Human (Homo sapiens) [TaxId: 9606]
d4ljma_ : (ALA405) (LEU480) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2vooa2 : (ARG111) (PHE184) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Lupus LA protein |Human (Homo sapiens) [TaxId: 9606]
d2dgoa_ : (PHE78) (TRP153) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1x5ua1 : (THR17) (LYS91) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Splicing factor 3B subunit 4 |Human (Homo sapiens) [TaxId: 9606]
d1cvja2 : (GLY99) (ARG172) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Poly(A)-binding protein |Human (Homo sapiens) [TaxId: 9606]
d2dnza_ : (SER229) (HIS304) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |RNA binding protein 23 |Human (Homo sapiens) [TaxId: 9606]
d1whya_ : (THR91) (PHE162) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Putative RNA-binding protein 15B, Rbm15b |Mouse (Mus musculus) [TaxId: 10090]
d2ek1g_ : (THR876) (GLY951) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2cpea1 : (SER361) (LEU444) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |RNA-binding protein EWS |Human (Homo sapiens) [TaxId: 9606]
d2x1fa_ : (ARG18) (TYR93) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1wwha1 : (THR173) (PRO241) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Nucleoporin 35 |Mouse (Mus musculus) [TaxId: 10090]
d2dh7a_ : (PHE97) (TRP172) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Nucleolysin TIAR |Human (Homo sapiens) [TaxId: 9606]
d1x5oa1 : (THR26) (PHE108) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |RNA-binding motif, single-stranded-interacting protein 1, RBMS1 |Human (Homo sapiens) [TaxId: 9606]
d1wela1 : (PHE430) (PRO504) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |RNA-binding protein 12 |Human (Homo sapiens) [TaxId: 9606]
d2dnya_ : (THR445) (VAL529) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1pgza2 : (LYS105) (LYS179) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Nuclear ribonucleoprotein A1 (RNP A1, UP1) |Human (Homo sapiens) [TaxId: 9606]
d4c7qa_ : (TYR6) (GLU81) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Tobacco (Nicotiana tabacum) [TaxId: 4097]
d2ghpa2 : (THR41) (HIS113) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |U4/U6 snRNA-associated-splicing factor PRP24 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1whva_ : (HIS439) (THR501) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Poly(A)-specific ribonuclease PARN |Mouse (Mus musculus) [TaxId: 10090]
d1x4ea1 : (LEU8) (MET76) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |RNA-binding motif, single-stranded-interacting protein 2, RBMS2 |Human (Homo sapiens) [TaxId: 9606]
d1cvjc2 : (GLY99) (ARG172) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Poly(A)-binding protein |Human (Homo sapiens) [TaxId: 9606]
d2dgva_ : (CYS652) (ILE725) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2ek6a_ : (THR14) (GLY89) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1b7fa2 : (THR211) (LEU288) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Sex-lethal protein |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1l3ka2 : (LYS105) (LYS179) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Nuclear ribonucleoprotein A1 (RNP A1, UP1) |Human (Homo sapiens) [TaxId: 9606]
d2dgta_ : (THR78) (LEU145) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2mb0b_ : (GLY8) (GLN83) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1x5sa1 : (GLY13) (GLN88) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Cold-inducible RNA-binding protein |Human (Homo sapiens) [TaxId: 9606]
d1no8a_ : (GLY105) (SER182) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Nuclear factor Aly |Mouse (Mus musculus) [TaxId: 10090]
d2mssa_ : (ILE111) (LYS183) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Neural RNA-binding protein Musashi-1 |Mouse (Mus musculus) [TaxId: 10090]
d3p5to_ : (ILE81) (PRO158) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3r27a_ : (PRO102) (TYR173) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2hzca_ : (ARG149) (ARG228) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Splicing factor U2AF 65 KDa subunit |Human (Homo sapiens) [TaxId: 9606]
d3p5tn_ : (ILE81) (PRO158) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3uwta1 : (CYS129) (ARG204) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2ek1b_ : (THR876) (GLY951) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4f26a_ : (GLY99) (ARG172) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.58