Protein Concepts Dictionary

Tableau information

Concept source:  d2ow9a_  amino acid (a.a.) range (LEU164)(GLY208)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: EHEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LEU164)  (PHE168) E1
	  (PRO172)  (ASP177) H2
	  (ASP177)  (ASP183) E3
	  (ASP183)  (SER188) E4
	  (GLY192)  (PHE196) E5
	  (PHE196)  (GLY208) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                        
H2     -153.2°   H2                                 
E3      163.4°  -42.9°   E3                          
E4      -88.3°   70.2° -107.3°   E4                   
E5      -32.0°  125.4° -161.7°  -56.5°   E5            
H6      -21.1°  149.5°  148.1° -103.3°  -50.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1youb_ :   (LEU185)  (GLY229)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Collagenase-3 (MMP-13) |Human (Homo sapiens) [TaxId: 9606]
 d3ma2a_ :   (LEU199)  (GLY246)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1mnca_ :   (LEU181)  (GLY225)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Neutrophil collagenase (MMP-8) |Human (Homo sapiens) [TaxId: 9606]
 d4i03a_ :   (LEU181)  (GLY225)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1b3db_ :   (LEU164)  (GLY208)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Stromelysin-1 (MMP-3) |Human (Homo sapiens), fibroblast [TaxId: 9606]
 d1os2a_ :   (LEU181)  (GLY225)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Macrophage elastase (MMP-12) |Human (Homo sapiens) [TaxId: 9606]
 d4h49c_ :   (LEU181)  (GLY225)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2ow9a_ :   (LEU164)  (GLY208)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Collagenase-3 (MMP-13) |Human (Homo sapiens) [TaxId: 9606]
 d456ca_ :   (LEU185)  (GLU223)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Collagenase-3 (MMP-13) |Human (Homo sapiens) [TaxId: 9606]
 d1jiza_ :    (LEU82)  (GLY126)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Macrophage elastase (MMP-12) |Human (Homo sapiens) [TaxId: 9606]
 d3ma2d_ :   (LEU199)  (GLY246)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.92