Protein Concepts Dictionary

Tableau information

Concept source:  d3drra2  amino acid (a.a.) range (GLY18)(THR84)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: EHEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLY18)   (THR27) E1
	   (THR27)   (GLY45) H2
	   (LYS46)   (GLY51) E3
	   (PRO55)   (LYS65) E4
	   (LYS70)   (ASP76) E5
	   (ARG78)   (THR84) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                        
H2     -128.8°   H2                                 
E3      -93.3° -113.2°   E3                          
E4       37.9°  109.7° -129.7°   E4                   
E5      146.8°  -83.5°   62.7°  148.3°   E5            
H6     -172.0°  -48.6°   94.6° -134.1°   38.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1bqnb_ :    (VAL21)   (ARG83)   [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
 d1hysb_ :    (LYS20)   (ARG83)   [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
 d1uwbb_ :    (GLY18)   (THR84)   [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
 d3bgra1 :    (GLY18)   (THR84)   [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
 d1uwba2 :    (GLY15)   (ARG83)   [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
 d3drsa2 :    (LYS22)   (THR84)   [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
 d1sv5b_ :    (GLY18)   (THR84)   [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
 d3c6ua2 :    (LYS22)   (THR84)   [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Hiv-1 m:b_hxb2r [TaxId: 11706]
 d2ynga1 :    (GLY18)   (THR84)   [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |automated matches |Hiv-1 m:b_hxb2r [TaxId: 11706]
 d1ikxb_ :  (GLY1018) (THR1084)   [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
 d3drra2 :    (GLY18)   (THR84)   [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   e.8