Protein Concepts Dictionary

Tableau information

Concept source:  d1ayba_  amino acid (a.a.) range (TRP6)(HIS84)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: EHEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (TRP6)   (ASN10) E1
	   (THR12)   (GLY24) H2
	   (GLY27)   (PRO33) E3
	   (ASP40)   (ARG46) E4
	   (ALA50)   (THR59) E5
	   (THR73)   (HIS84) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                        
H2      138.2°   H2                                 
E3      -38.2°  159.3°   E3                          
E4      120.9°  -26.6°  158.8°   E4                   
E5      -83.0°  132.4°  -44.9°  156.0°   E5            
H6      139.1°  -35.8°  164.9°  -28.2°  132.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1sprb_ :     (TRP5)   (HIS90)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |c-src tyrosine kinase |Rous sarcoma virus [TaxId: 11886]
 d4ohda1 :     (TRP6)   (HIS84)   [view usage] : d.93.1.0 |SH2-like |SH2 domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1ayaa_ :     (TRP6)   (GLU83)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |Tyrosine phosphatase Syp |Mouse (Mus musculus) [TaxId: 10090]
 d3ps5a1 :     (TRP4)   (GLN82)   [view usage] : d.93.1.0 |SH2-like |SH2 domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1ayba_ :     (TRP6)   (HIS84)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |Tyrosine phosphatase Syp |Mouse (Mus musculus) [TaxId: 10090]
 d3vrna3 :   (GLY237)  (GLY305)   [view usage] : d.93.1.0 |SH2-like |SH2 domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1nzlb_ :   (TRP254)  (HIS339)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |c-src tyrosine kinase |Rous sarcoma virus [TaxId: 11886]
 d3ov1a_ :    (TRP60)  (ARG136)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |Growth factor receptor-bound protein 2 (GRB2) |Human (Homo sapiens) [TaxId: 9606]
 d3uf4a2 :   (TRP149)  (LYS234)   [view usage] : d.93.1.0 |SH2-like |SH2 domain |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1bkla_ :     (TRP5)   (HIS90)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |c-src tyrosine kinase |Rous sarcoma virus [TaxId: 11886]
 d2oq1a2 :   (TRP165)  (LYS244)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |Tyrosine-protein kinase zap-70 |Human (Homo sapiens) [TaxId: 9606]
 d1bkma_ :     (TRP5)   (HIS90)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |c-src tyrosine kinase |Rous sarcoma virus [TaxId: 11886]
 d1lcka2 :   (TRP127)  (ALA212)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |p56-lck tyrosine kinase |Human (Homo sapiens) [TaxId: 9606]
 d3ps5a2 :   (TRP110)  (THR197)   [view usage] : d.93.1.0 |SH2-like |SH2 domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4je4a_ :     (TRP6)   (HIS84)   [view usage] : d.93.1.0 |SH2-like |SH2 domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1yvha3 :   (GLY267)  (GLY335)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |Cbl |Human (Homo sapiens) [TaxId: 9606]
 d2izva2 :   (CYS286)  (LYS365)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |Suppressor of cytokine signaling 4, SOCS-4 |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.93