Protein Concepts Dictionary

Tableau information

Concept source:  d2aoba_  amino acid (a.a.) range (TRP60)(GLY114)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: EHEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (TRP60)   (LYS64) E1
	   (PRO66)   (GLN77) H2
	   (ALA82)   (GLU87) E3
	   (ASP94)  (LYS100) E4
	  (ASP104)  (LYS109) E5
	  (VAL110)  (GLY114) E6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                        
H2      151.1°   H2                                 
E3      -38.2°  168.0°   E3                          
E4      123.5°  -28.7°  161.6°   E4                   
E5      -74.5°  134.2°  -36.8°  161.3°   E5            
E6      -82.5°  126.1°  -47.7°  148.4°   15.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1u5wf_ :    (GLU46)  (PRO110)   [view usage] : c.51.4.3 |Anticodon-binding domain-like |ITPase-like |YjjX-like |Hypothetical protein YjjX |Escherichia coli [TaxId: 562]
 d3in7c_ :    (TRP60)  (GLY114)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |Growth factor receptor-bound protein 2 (GRB2) |Human (Homo sapiens) [TaxId: 9606]
 d2huwa_ :    (TRP60)  (GLY114)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |Growth factor receptor-bound protein 2 (GRB2) |Human (Homo sapiens) [TaxId: 9606]
 d2aoaa_ :    (TRP60)  (GLY114)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |Growth factor receptor-bound protein 2 (GRB2) |Human (Homo sapiens) [TaxId: 9606]
 d3in7a_ :    (TRP60)  (GLY114)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |Growth factor receptor-bound protein 2 (GRB2) |Human (Homo sapiens) [TaxId: 9606]
 d1bm2a_ :    (TRP60)  (GLY114)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |Growth factor receptor-bound protein 2 (GRB2) |Human (Homo sapiens) [TaxId: 9606]
 d1fyra_ :    (TRP60)  (GLY114)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |Growth factor receptor-bound protein 2 (GRB2) |Human (Homo sapiens) [TaxId: 9606]
 d1u5wc_ :    (GLU46)  (PRO110)   [view usage] : c.51.4.3 |Anticodon-binding domain-like |ITPase-like |YjjX-like |Hypothetical protein YjjX |Escherichia coli [TaxId: 562]
 d1u5wh_ :    (GLU46)  (PRO110)   [view usage] : c.51.4.3 |Anticodon-binding domain-like |ITPase-like |YjjX-like |Hypothetical protein YjjX |Escherichia coli [TaxId: 562]
 d3s9ka_ :    (TRP11)   (VAL78)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1bmba_ :    (TRP60)  (GLY114)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |Growth factor receptor-bound protein 2 (GRB2) |Human (Homo sapiens) [TaxId: 9606]
 d1zwyd_ :    (ASP52)  (PRO117)   [view usage] : c.51.4.0 |Anticodon-binding domain-like |ITPase-like |automated matches |automated matches |Vibrio cholerae [TaxId: 666]
 d2aoba_ :    (TRP60)  (GLY114)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |Growth factor receptor-bound protein 2 (GRB2) |Human (Homo sapiens) [TaxId: 9606]
 d2auga_ :   (TRP439)  (ASP496)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3imjb_ :    (TRP60)  (GLY114)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |Growth factor receptor-bound protein 2 (GRB2) |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.51,    d.93