Protein Concepts Dictionary

Tableau information

Concept source:  d1a4za_  amino acid (a.a.) range (LYS35)(ASP109)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: EEHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (LYS35)   (ASN41) E1
	   (CYS49)   (ASP55) E2
	   (ASP55)   (GLN71) H3
	   (SER74)   (MET79) H4
	   (ASP80)   (ASP98) H5
	   (ASP98)  (ASP109) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                        
E2      134.7°   E2                                 
H3      -91.4°  -76.7°   H3                          
H4       47.3°  -96.1°  -50.7°   H4                   
H5      -57.1° -148.5°  134.7° -104.1°   H5            
H6       96.4°  -77.9° -150.8° -119.0°  -71.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4i8pb_ :    (ARG25)  (GLY103)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Maize (Zea mays) [TaxId: 4577]
 d4fr8a_ :    (ARG34)  (GLY111)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Human (Homo sapiens), mitochondrial [TaxId: 9606]
 d3jz4a_ :    (GLY24)   (GLU96)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Escherichia coli [TaxId: 562]
 d4o6ra_ :    (GLY18)   (GLY91)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
 d2d4ea_ :    (GLY41)  (MET109)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
 d4gnza_ :   (LYS437)  (ASP510)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d3v9ga_ :    (GLY88)  (GLY152)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4i8qa_ :    (ASN26)  (GLY101)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Solanum lycopersicum [TaxId: 4081]
 d4dalg_ :    (ALA17)   (CYS89)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
 d2opxa_ :    (ASP21)   (GLY95)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Escherichia coli [TaxId: 469008]
 d3rjlb_ :    (GLU62)  (GLU123)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Bacillus licheniformis [TaxId: 279010]
 d3ifga_ :    (ALA28)   (GLU99)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 320372]
 d3iwka_ :    (LYS23)   (ILE98)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pea (Pisum sativum) [TaxId: 3888]
 d3iwja_ :    (LYS23)   (ASP99)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pea (Pisum sativum) [TaxId: 3888]
 d3v9gc_ :    (ASP77)  (GLY152)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4dala_ :    (ALA17)   (ASN88)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.82