Protein Concepts Dictionary

Tableau information

Concept source:  d4gxpa_  amino acid (a.a.) range (ASP221)(VAL290)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: EEHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASP221)  (GLY230) E1
	  (PHE232)  (ASP237) E2
	  (PRO241)  (PHE254) H3
	  (ALA256)  (GLY265) H4
	  (PRO268)  (GLN274) H5
	  (PRO284)  (VAL290) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                        
E2       28.8°   E2                                 
H3      135.3°  157.6°   H3                          
H4     -142.9° -115.4°   73.4°   H4                   
H5       52.9°   66.5°  -91.1° -117.8°   H5            
H6     -103.2° -107.3°   90.9°  -98.1°  143.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.4°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3ahyc_ :   (GLY218)  (LEU285)   [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Trichoderma reesei [TaxId: 51453]
 d2e3zb_ :   (GLY221)  (ASP294)   [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Basidomycetes fungus (Phanerochaete chrysosporium) [TaxId: 5306]
 d3ahya_ :   (GLY218)  (PHE292)   [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Trichoderma reesei [TaxId: 51453]
 d3wq5b_ :   (LYS265)  (LEU332)   [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |automated matches |Camellia sinensis [TaxId: 4442]
 d3ahyb_ :   (ILE222)  (LEU285)   [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Trichoderma reesei [TaxId: 51453]
 d4gxpa_ :   (ASP221)  (VAL290)   [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |automated matches |Thermotoga maritima [TaxId: 243274]
 d2e3za_ :   (GLY221)  (LEU288)   [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Basidomycetes fungus (Phanerochaete chrysosporium) [TaxId: 5306]
 d3wq4a_ :   (LYS265)  (LEU332)   [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |automated matches |Camellia sinensis [TaxId: 4442]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1