Protein Concepts Dictionary

Tableau information

Concept source:  d1vgma_  amino acid (a.a.) range (LEU19)(MET87)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: EEHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (LEU19)   (ILE25) E1
	   (GLY27)   (TYR31) E2
	   (ASP35)   (ALA43) H3
	   (SER44)   (GLY55) H4
	   (ASN59)   (PHE74) H5
	   (GLU78)   (MET87) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                        
E2      172.7°   E2                                 
H3     -125.2°   55.6°   H3                          
H4      103.7°   74.8°  130.4°   H4                   
H5     -104.5°   82.8°  -74.4°  103.4°   H5            
H6      -43.1°  144.0° -105.9°  116.4°  -61.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1nxea_ :    (ILE56)  (PHE124)   [view usage] : a.103.1.1 |Citrate synthase |Citrate synthase |Citrate synthase |Citrate synthase |Escherichia coli [TaxId: 562]
 d1o7xb_ :    (LEU18)   (MET86)   [view usage] : a.103.1.1 |Citrate synthase |Citrate synthase |Citrate synthase |Citrate synthase |Sulfolobus solfataricus [TaxId: 2287]
 d1o7xc_ :    (LEU18)   (LEU85)   [view usage] : a.103.1.1 |Citrate synthase |Citrate synthase |Citrate synthase |Citrate synthase |Sulfolobus solfataricus [TaxId: 2287]
 d1a59a_ :    (ILE19)   (LEU86)   [view usage] : a.103.1.1 |Citrate synthase |Citrate synthase |Citrate synthase |Citrate synthase |Antarctic bacterium DS2-3R [TaxId: 56673]
 d1o7xd_ :    (LEU18)   (MET86)   [view usage] : a.103.1.1 |Citrate synthase |Citrate synthase |Citrate synthase |Citrate synthase |Sulfolobus solfataricus [TaxId: 2287]
 d6csca_ :    (THR55)  (ASN130)   [view usage] : a.103.1.1 |Citrate synthase |Citrate synthase |Citrate synthase |Citrate synthase |Chicken (Gallus gallus) [TaxId: 9031]
 d1al6a_ :    (THR55)  (ASN130)   [view usage] : a.103.1.1 |Citrate synthase |Citrate synthase |Citrate synthase |Citrate synthase |Chicken (Gallus gallus) [TaxId: 9031]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.103