Protein Concepts Dictionary

Tableau information

Concept source:  d1cmla1  amino acid (a.a.) range (PRO16)(ASN80)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: EEHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (PRO16)   (PRO27) E1
	   (ALA28)   (GLU32) E2
	   (GLU32)   (ASN45) H3
	   (THR50)   (SER63) H4
	   (LYS66)   (TYR71) E5
	   (THR73)   (ASN80) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                        
E2      -76.0°   E2                                 
H3       58.7°   98.4°   H3                          
H4     -138.5° -107.8°  151.3°   H4                   
E5       82.3°  144.8°   46.4°  106.8°   E5            
H6       73.5°  -87.7°  -21.6°  146.3°   59.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.4°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1u0va1 :    (ALA21)   (ASN80)   [view usage] : c.95.1.2 |Thiolase-like |Thiolase-like |Chalcone synthase-like |Chalcone synthase |Alfalfa (Medicago sativa) [TaxId: 3879]
 d4japa1 :     (MET1)   (LEU62)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d1u0ma1 :     (ARG6)   (GLU61)   [view usage] : c.95.1.2 |Thiolase-like |Thiolase-like |Chalcone synthase-like |Putative polyketide synthase SCO1206 |Streptomyces coelicolor [TaxId: 1902]
 d3a5sa1 :     (LEU9)   (ASN73)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Rheum palmatum [TaxId: 137221]
 d4wuma1 :    (PRO16)   (ASN80)   [view usage] : c.95.1.2 |Thiolase-like |Thiolase-like |Chalcone synthase-like |automated matches |Freesia hybrid [TaxId: 867926]
 d4jaoa1 :     (SER2)   (LEU62)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d3wd8a1 :    (PRO16)   (ASN80)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Citrus microcarpa [TaxId: 164113]
 d3a5qa1 :     (LEU9)   (ASN73)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Rheum palmatum [TaxId: 137221]
 d1z1ea1 :    (ALA21)   (GLU79)   [view usage] : c.95.1.2 |Thiolase-like |Thiolase-like |Chalcone synthase-like |automated matches |Peanut (Arachis hypogaea) [TaxId: 3818]
 d1xesa1 :    (ALA23)   (ASN82)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Scots pine (Pinus sylvestris) [TaxId: 3349]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.95