Protein Concepts Dictionary

Tableau information

Concept source:  d3wq5b_  amino acid (a.a.) range (ASP338)(GLU416)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: EEHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASP338)  (TYR344) E1
	  (ILE346)  (ASN357) E2
	  (SER362)  (LEU368) H3
	  (LEU368)  (ALA373) E4
	  (LYS394)  (GLU405) H5
	  (VAL411)  (GLU416) E6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                        
E2       87.8°   E2                                 
H3      -89.1°  -82.3°   H3                          
E4      -63.0°  150.5°   99.9°   E4                   
H5      152.0°   66.5°   77.3° -142.9°   H5            
E6      -31.2°   90.5° -120.2°  -62.8°  149.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2dgaa_ :   (ASP327)  (GLU407)   [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |automated matches |Wheat (Triticum aestivum) [TaxId: 4565]
 d2jf6b_ :   (ASP338)  (VAL414)   [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Rauvolfia serpentina [TaxId: 4060]
 d3wq4b_ :   (ASP338)  (GLU416)   [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |automated matches |Camellia sinensis [TaxId: 4442]
 d3wq5b_ :   (ASP338)  (GLU416)   [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |automated matches |Camellia sinensis [TaxId: 4442]
 d1e1ea_ :   (ASN326)  (GLU406)   [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |Plant beta-glucosidase (myrosinase) |Maize (Zea mays), zmglu1 [TaxId: 4577]
 d3gnoa_ :   (ASP314)  (GLU394)   [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Oryza sativa [TaxId: 39947]
 d1e1eb_ :   (ASN326)  (GLU406)   [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |Plant beta-glucosidase (myrosinase) |Maize (Zea mays), zmglu1 [TaxId: 4577]
 d3ptka_ :   (ASP315)  (GLU393)   [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Rice (Oryza sativa) [TaxId: 4530]
 d3wq4a_ :   (ASP338)  (GLU416)   [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |automated matches |Camellia sinensis [TaxId: 4442]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1