Protein Concepts Dictionary

Tableau information

Concept source:  d2awwa_  amino acid (a.a.) range (LYS316)(ALA373)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: EEHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LYS316)  (PRO326) E1
	  (PHE331)  (GLY335) E2
	  (GLY336)  (PRO343) H3
	  (SER347)  (SER352) E4
	  (GLY357)  (GLY363) H5
	  (GLY368)  (ALA373) E6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                        
E2     -127.0°   E2                                 
H3      118.2°  -96.3°   H3                          
E4       51.8°  146.6°   67.6°   E4                   
H5      130.4°  102.4°  -43.0°  -85.7°   H5            
E6      -81.9°  -87.3° -149.3°  121.8°  106.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2awua_ :   (LYS316)  (ALA373)   [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2awwa_ :   (LYS316)  (ALA373)   [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2i1nb_ :   (MET126)  (ARG185)   [view usage] : b.36.1.0 |PDZ domain-like |PDZ domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3rl7d_ :   (MET219)  (ARG278)   [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2awxa_ :   (LYS316)  (ALA373)   [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.36