Tableau information
Concept source: d3r66c1 amino acid (a.a.) range (ASP4)(LYS77)
nSSEs in this Concept: 6
String of secondary struct.elems. (SSEs) defining this concept: EEHEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP4) (LEU10) E1
(PHE15) (SER21) E2
(SER24) (LYS35) H3
(GLN43) (VAL47) E4
(PRO59) (GLN63) H5
(GLY68) (LYS77) E6
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 139.9° E2
H3 -67.1° 139.8° H3
E4 111.2° -81.9° 120.5° E4
H5 64.0° -122.8° -94.5° -47.8° H5
E6 -40.5° 110.6° -69.5° 147.5° 103.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2izvb_ : (PHE4) (ASP82) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1p8la2 : (ILE31) (PHE98) [view usage] : d.142.2.1 |ATP-grasp |DNA ligase/mRNA capping enzyme, catalytic domain |ATP-dependent DNA ligase catalytic domain |ATP-dependent DNA ligase, N-terminal domain |Chlorella virus PBCV-1 [TaxId: 10506]
d3qc8b_ : (GLU571) (ALA648) [view usage] : d.15.1.2 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |UBX domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3r3md_ : (PRO572) (ALA648) [view usage] : d.15.1.2 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |UBX domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3sdlc1 : (ASP4) (VAL75) [view usage] : d.15.1.0 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2murb_ : (SER99) (LEU173) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |Ubiquitin |Human (Homo sapiens) [TaxId: 9606]
d3r66c1 : (ASP4) (LYS77) [view usage] : d.15.1.0 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3qq8b_ : (PRO572) (ALA648) [view usage] : d.15.1.2 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |UBX domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.142, d.15