Protein Concepts Dictionary

Tableau information

Concept source:  d1y0ba1  amino acid (a.a.) range (ASN90)(VAL153)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: EEHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASN90)   (SER98) E1
	  (THR103)  (SER110) E2
	  (SER110)  (SER115) H3
	  (HIS119)  (ASP125) E4
	  (GLN131)  (GLN142) H5
	  (ALA145)  (VAL153) E6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                        
E2      156.1°   E2                                 
H3       98.8°   62.5°   H3                          
E4      -40.1°  136.6°  123.3°   E4                   
H5      159.0°  -35.3°  -74.0°  158.4°   H5            
E6      -42.8°  122.5°  101.7°  -23.1°  157.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.7°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3pgla_ :   (PHE114)  (ARG178)   [view usage] : c.108.1.16 |HAD-like |HAD-like |NLI interacting factor-like phosphatase |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1y0bd_ :    (ASN90)  (VAL153)   [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Xanthine phosphoribosyltransferase |Bacillus subtilis [TaxId: 1423]
 d2hhld_ :    (ASP51)  (ARG116)   [view usage] : c.108.1.16 |HAD-like |HAD-like |NLI interacting factor-like phosphatase |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1t9za_ :   (ILE116)  (ARG178)   [view usage] : c.108.1.16 |HAD-like |HAD-like |NLI interacting factor-like phosphatase |Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 |Human (Homo sapiens) [TaxId: 9606]
 d2dy0b_ :    (ILE96)  (ILE155)   [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d2dy0a_ :    (ILE96)  (ILE155)   [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3l0ya_ :   (ASP113)  (PHE177)   [view usage] : c.108.1.16 |HAD-like |HAD-like |NLI interacting factor-like phosphatase |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1g2qa_ :    (PHE99)  (VAL158)   [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Adenine PRTase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3l0ca_ :   (PHE114)  (ARG178)   [view usage] : c.108.1.16 |HAD-like |HAD-like |NLI interacting factor-like phosphatase |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3ozgb_ :   (THR101)  (LEU173)   [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Plasmodium falciparum [TaxId: 5838]
 d4mb6a_ :   (ILE100)  (ILE159)   [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Yersinia pseudotuberculosis [TaxId: 273123]
 d1qb7a_ :   (LEU111)  (ILE175)   [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Adenine PRTase |Leishmania donovani [TaxId: 5661]
 d1y0ba1 :    (ASN90)  (VAL153)   [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Xanthine phosphoribosyltransferase |Bacillus subtilis [TaxId: 1423]
 d4lzab_ :    (LEU89)  (LEU148)   [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Thermoanaerobacter pseudethanolicus [TaxId: 340099]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 c.108,    c.61