Tableau information
Concept source: d2uyzb_ amino acid (a.a.) range (LYS23)(GLN92)
nSSEs in this Concept: 6
String of secondary struct.elems. (SSEs) defining this concept: EEHEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS23) (GLN29) E1
(SER31) (LYS37) E2
(LEU44) (GLN55) H3
(LEU62) (PHE66) E4
(THR76) (GLY81) H5
(ASP86) (GLN92) E6
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 161.1° E2
H3 -55.0° 129.0° H3
E4 123.5° -69.4° 132.8° E4
H5 79.2° -110.6° -112.8° -44.6° H5
E6 -34.9° 127.5° -58.4° 152.0° 109.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.2° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2o6vh_ : (GLN702) (LEU771) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |Ubiquitin |Human (Homo sapiens) [TaxId: 9606]
d3wanb_ : (PRO48) (SER131) [view usage] : d.15.1.3 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |GABARAP-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1bt0a_ : (MET1) (LEU71) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |Rub1 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d3dbrl_ : (MET101) (ARG174) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |Nedd8 |Human (Homo sapiens) [TaxId: 9606]
d1yqba1 : (ILE22) (ARG96) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |Ubiquilin-3 |Human (Homo sapiens) [TaxId: 9606]
d3nobc_ : (MET1) (LEU71) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1j8ca_ : (ILE33) (ILE102) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |Ubiquitin-like N-terminal domain of PLIC-2 |Human (Homo sapiens) [TaxId: 9606]
d1y8rc_ : (ILE22) (GLY96) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3a4sc_ : (GLN339) (TRP411) [view usage] : d.15.1.0 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d4hcpb_ : (MET1) (LEU71) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |Nedd8 |Human (Homo sapiens) [TaxId: 9606]
d2uyzb_ : (LYS23) (GLN92) [view usage] : d.15.1.0 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2iy0b_ : (LYS23) (TYR91) [view usage] : d.15.1.0 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4bkga_ : (ASN19) (GLN88) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1wjua_ : (GLY14) (GLU90) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |NEDD8 ultimate buster-1, NUB1 |Human (Homo sapiens) [TaxId: 9606]
d1nddc_ : (MET201) (LEU271) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |Nedd8 |Human (Homo sapiens) [TaxId: 9606]
d1wm3a_ : (ASN19) (GLN88) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |SUMO-2 |Human (Homo sapiens) [TaxId: 9606]
d1tgzb_ : (ILE22) (GLN92) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |SUMO-1 (smt3 homologue) |Human (Homo sapiens) [TaxId: 9606]
d3rzwc_ : (ILE22) (GLN92) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1wxsa1 : (MET1) (ILE77) [view usage] : d.15.1.6 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |BM-002-like |Ubiquitin-fold modifier 1 |Human (Homo sapiens) [TaxId: 9606]
d1a5ra_ : (LYS23) (TYR91) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |SUMO-1 (smt3 homologue) |Human (Homo sapiens) [TaxId: 9606]
d3dbrj_ : (ILE103) (GLY175) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |Nedd8 |Human (Homo sapiens) [TaxId: 9606]
d2ckhb1 : (ILE17) (GLN87) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |SUMO-2 |Human (Homo sapiens) [TaxId: 9606]
d1mfwa_ : (VAL59) (SER133) [view usage] : d.15.11.1 |beta-Grasp (ubiquitin-like) |Doublecortin (DC) |Doublecortin (DC) |Doublecortin-like kinase Dclk |Human (Homo sapiens) [TaxId: 9606]
d2d07b_ : (ILE18) (GLN88) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2io0b_ : (ILE18) (GLN88) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |SUMO-2 |Human (Homo sapiens) [TaxId: 9606]
d1wm2a_ : (ASN15) (GLN88) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |SUMO-2 |Human (Homo sapiens) [TaxId: 9606]
d1we7a_ : (VAL26) (LEU106) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |Splicing factor 3 subunit 1, C-terminal domain |Mouse (Mus musculus) [TaxId: 10090]
d3rd2a_ : (GLN349) (GLY419) [view usage] : d.15.1.0 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1sgha3 : (SER6) (ALA82) [view usage] : d.15.1.4 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |First domain of FERM |Moesin |Human (Homo sapiens) [TaxId: 9606]
d3noba_ : (MET1) (GLY75) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3v61a_ : (ILE24) (ARG93) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
d4npna_ : (ASN19) (PHE87) [view usage] : d.15.1.0 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1wywb_ : (GLY19) (GLN92) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2io1b_ : (ASP15) (GLN87) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3gzni_ : (HIS-2) (LEU69) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |Nedd8 |Human (Homo sapiens) [TaxId: 9606]
d2io1d_ : (ILE17) (GLN87) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1euvb_ : (ASN25) (ARG93) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |SUMO-1 (smt3 homologue) |Baker's yeast (Saccharomyces cerevisiae), smt3 [TaxId: 4932]
d1wx7a1 : (ILE18) (GLN90) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |Ubiquilin-3 |Human (Homo sapiens) [TaxId: 9606]
d3rzwd_ : (ILE22) (GLY96) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2ekec_ : (ILE1024) (ARG1093) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |SUMO-1 (smt3 homologue) |Baker's yeast (Saccharomyces cerevisiae), smt3 [TaxId: 4932]
d2iy1b_ : (ILE17) (GLY92) [view usage] : d.15.1.0 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2zvnc1 : (MET1) (LEU71) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3uinb_ : (ILE18) (GLN88) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |automated matches |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.15