Protein Concepts Dictionary

Tableau information

Concept source:  d2hbxa_  amino acid (a.a.) range (PRO4)(GLN55)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: EEHEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (PRO4)    (HIS9) E1
	   (SER10)   (PRO14) E2
	   (SER17)   (LYS23) H3
	   (ALA29)   (SER35) E4
	   (ASP39)   (MET45) E5
	   (ARG51)   (GLN55) E6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                        
E2      -67.0°   E2                                 
H3      -58.0°   92.0°   H3                          
E4      119.6°  -87.4° -177.5°   E4                   
E5      -37.3°   80.3°  -20.9°  156.8°   E5            
E6     -155.7°  -88.8°  128.5°  -53.9°  144.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.5°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4igna_ :     (LYS2)   (GLU51)   [view usage] : c.1.9.0 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2hbxa_ :     (PRO4)   (GLN55)   [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |2-amino-3-carboxymuconate 6-semialdehyde decarboxylase NbaD |Pseudomonas fluorescens [TaxId: 294]
 d4eria_ :     (ARG5)   (GLN55)   [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |2-amino-3-carboxymuconate 6-semialdehyde decarboxylase NbaD |Pseudomonas fluorescens [TaxId: 294]
 d4ofca_ :     (LYS2)   (GLU51)   [view usage] : c.1.9.0 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2wm1a_ :     (LYS2)   (ARG47)   [view usage] : c.1.9.0 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2hbva1 :     (ARG5)   (ARG51)   [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |2-amino-3-carboxymuconate 6-semialdehyde decarboxylase NbaD |Pseudomonas fluorescens [TaxId: 294]
 d4epka_ :     (PRO4)   (GLN55)   [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |2-amino-3-carboxymuconate 6-semialdehyde decarboxylase NbaD |Pseudomonas fluorescens [TaxId: 294]
 d4ifra_ :     (PRO4)   (GLN55)   [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |2-amino-3-carboxymuconate 6-semialdehyde decarboxylase NbaD |Pseudomonas fluorescens [TaxId: 294]
 d4eraa_ :     (PRO4)   (GLN55)   [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |2-amino-3-carboxymuconate 6-semialdehyde decarboxylase NbaD |Pseudomonas fluorescens [TaxId: 294]
 d4ifka_ :     (ARG5)   (GLN55)   [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |2-amino-3-carboxymuconate 6-semialdehyde decarboxylase NbaD |Pseudomonas fluorescens [TaxId: 294]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1