Tableau information
Concept source: d3phxb_ amino acid (a.a.) range (GLU80)(ASN151)
nSSEs in this Concept: 6
String of secondary struct.elems. (SSEs) defining this concept: EEHEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLU80) (ASN89) E1
(ARG92) (GLU97) E2
(THR103) (LEU114) H3
(TRP123) (GLU127) E4
(GLY128) (GLN134) E5
(SER146) (ASN151) E6
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 161.4° E2
H3 -58.4° 126.2° H3
E4 107.7° -88.0° 110.3° E4
E5 -120.1° 43.1° -103.2° 131.1° E5
E6 -35.7° 125.8° -71.2° 138.6° -85.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2awta_ : (ILE18) (GLN89) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3u30a2 : (MET77) (LEU147) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |Ubiquitin |Human (Homo sapiens) [TaxId: 9606]
d1uela_ : (THR4) (THR75) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |Ubiquitin-like domain of Rad23 homolog B (Hhr23B) |Human (Homo sapiens) [TaxId: 9606]
d3pseb2 : (ILE84) (LEU152) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3wa0d1 : (PRO19) (ALA98) [view usage] : d.15.1.0 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3b1lx_ : (VAL3) (GLN71) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1ef1a3 : (SER6) (ARG81) [view usage] : d.15.1.4 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |First domain of FERM |Moesin |Human (Homo sapiens) [TaxId: 9606]
d2jvca1 : (MET6) (LEU76) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |automated matches |Paramecium tetraurelia strain d4-2 [TaxId: 412030]
d1t0qc_ : (THR3) (PHE83) [view usage] : d.15.12.1 |beta-Grasp (ubiquitin-like) |TmoB-like |TmoB-like |Toluene, o-xylene monooxygenase oxygenase subunit TouB |Pseudomonas stutzeri [TaxId: 316]
d1m94a_ : (ILE2) (TYR72) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |Ubiquitin-like modifier protein hub1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4ii2b_ : (MET1) (LEU71) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |automated matches |Schizosaccharomyces pombe [TaxId: 284812]
d3tbld_ : (ILE3) (LEU71) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |Ubiquitin |Human (Homo sapiens) [TaxId: 9606]
d1j19a3 : (ASN6) (ARG81) [view usage] : d.15.1.4 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |First domain of FERM |Radixin |Mouse (Mus musculus) [TaxId: 10090]
d2knba_ : (MET1) (GLN71) [view usage] : d.15.1.0 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4nnjb_ : (MET1) (GLY75) [view usage] : d.15.1.0 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
d3phxb_ : (GLU80) (ASN151) [view usage] : d.15.1.0 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3wa0b1 : (VAL24) (ALA98) [view usage] : d.15.1.0 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3wa0c1 : (VAL24) (LEU97) [view usage] : d.15.1.0 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1e5wa3 : (PRO2) (ARG81) [view usage] : d.15.1.4 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |First domain of FERM |Moesin |Human (Homo sapiens) [TaxId: 9606]
d3dqva_ : (LEU102) (LEU171) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |Nedd8 |Human (Homo sapiens) [TaxId: 9606]
d3rt3b2 : (LEU82) (LEU152) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1wgya_ : (GLU9) (LEU88) [view usage] : d.15.1.5 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ras-binding domain, RBD |Rap guanine nucleotide exchange factor 5, RapGEF5 |Human (Homo sapiens) [TaxId: 9606]
d3wa0a1 : (VAL24) (LEU97) [view usage] : d.15.1.0 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3rn9c_ : (THR3) (PHE83) [view usage] : d.15.12.1 |beta-Grasp (ubiquitin-like) |TmoB-like |TmoB-like |Toluene, o-xylene monooxygenase oxygenase subunit TouB |Pseudomonas sp. [TaxId: 320855]
d3olmd_ : (MET1) (LEU71) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1lfda_ : (GLY14) (LYS99) [view usage] : d.15.1.5 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ras-binding domain, RBD |Ral guanosine-nucleotide exchange factor, RalGDS |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1wgda_ : (VAL8) (LYS87) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, HERPUD1 |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.15