Tableau information
Concept source: d3tnmb1 amino acid (a.a.) range (SER63)(VAL106)
nSSEs in this Concept: 6
String of secondary struct.elems. (SSEs) defining this concept: EEHEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER63) (SER67) E1
(ASN69) (GLY77) E2
(GLN79) (GLU85) H3
(GLU85) (TYR91) E4
(ASN95) (GLY99) E5
(GLY100) (VAL106) E6
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 154.3° E2
H3 -45.5° -150.7° H3
E4 -48.8° 144.8° 59.8° E4
E5 108.2° -49.8° -119.0° 151.9° E5
E6 135.9° -18.8° -157.4° 141.7° 39.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1g9ea_ : (THR69) (SER117) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Camelid IG heavy chain variable domain, VHh |Llama (Lama glama) [TaxId: 9844]
d4aiza_ : (SER62) (LEU108) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2cr6a_ : (ASN60) (GLU102) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1um4l1 : (SER65) (LYS109) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin light chain kappa variable domain, VL-kappa |Mouse (Mus musculus), cluster 4 [TaxId: 10090]
d1yeeh1 : (THR68) (SER112) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]
d1tnra_ : (SER64) (LEU125) [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |Tumor necrosis factor (TNF) |Human (Homo sapiens) [TaxId: 9606]
d1g1ca_ : (TYR53) (ALA98) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Titin |Human (Homo sapiens), different modules [TaxId: 9606]
d1ucta2 : (GLN148) (VAL195) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Ig alpha Fc receptor, FCARI (CD89) |Human (Homo sapiens) [TaxId: 9606]
d2jb6l1 : (SER65) (VAL110) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4w68a_ : (SER72) (SER129) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Llama (Lama glama) [TaxId: 9844]
d3oskb_ : (ILE67) (ASP118) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1bf5a2 : (LEU333) (MET392) [view usage] : b.2.5.5 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |STAT DNA-binding domain |STAT-1, DNA-binding domain |Human (Homo sapiens) [TaxId: 9606]
d4p48a1 : (SER64) (LEU110) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d1cs6a2 : (ARG156) (LEU203) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Axonin-1 |Chicken (Gallus gallus) [TaxId: 9031]
d3s97c1 : (ARG186) (ARG235) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ev2g1 : (GLY206) (GLU250) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Fibroblast growth factor receptor, FGFR |Human (Homo sapiens), FGFR2a [TaxId: 9606]
d2agjh2 : (PRO176) (ILE226) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain mu constant domain 1, CH1-mu |Human (Homo sapiens) [TaxId: 9606]
d1olla2 : (HIS139) (LEU184) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Ligand binding domain of NK receptor NKp46 |Human (Homo sapiens) [TaxId: 9606]
d3t0wa_ : (SER63) (ASP107) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4u05a_ : (SER72) (SER129) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Llama (Lama glama) [TaxId: 9844]
d1ev2e1 : (GLY206) (GLU250) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Fibroblast growth factor receptor, FGFR |Human (Homo sapiens), FGFR2a [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.2, b.1, b.22