Protein Concepts Dictionary

Tableau information

Concept source:  d3ri7a_  amino acid (a.a.) range (PRO403)(MET471)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: EEEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (PRO403)  (VAL407) E1
	  (TRP412)  (HIS421) E2
	  (ARG424)  (GLY429) E3
	  (SER430)  (GLN439) H4
	  (ASN449)  (GLY457) H5
	  (THR463)  (MET471) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                        
E2      140.2°   E2                                 
E3       45.1°  151.2°   E3                          
H4     -143.7°  -13.3°  139.1°   H4                   
H5     -121.5°  -68.2°  138.8°  -77.6°   H5            
H6     -112.8°   69.6°  -82.8°   56.5°  125.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3rnfa_ :   (PRO403)  (SER472)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouA |Pseudomonas sp. [TaxId: 320855]
 d3dhgd_ :   (LEU404)  (MET471)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Pseudomonas mendocina [TaxId: 300]
 d4p1ba_ :   (PRO403)  (MET471)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Pseudomonas mendocina [TaxId: 300]
 d3ge8d_ :   (PRO403)  (MET471)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Pseudomonas mendocina [TaxId: 300]
 d3ri7a_ :   (PRO403)  (MET471)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Pseudomonas mendocina [TaxId: 300]
 d3dhga_ :   (LEU404)  (MET471)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Pseudomonas mendocina [TaxId: 300]
 d3ge3a_ :   (PRO403)  (MET471)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Pseudomonas mendocina [TaxId: 300]
 d3rnea_ :   (PRO403)  (SER472)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouA |Pseudomonas sp. [TaxId: 320855]
 d3rnca_ :   (ILE404)  (SER472)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouA |Pseudomonas sp. [TaxId: 320855]
 d3n1za_ :   (ILE404)  (GLN492)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouA |Pseudomonas sp. [TaxId: 320855]
 d2rdba_ :   (PRO403)  (SER472)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouA |Pseudomonas stutzeri [TaxId: 316]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.25