Protein Concepts Dictionary

Tableau information

Concept source:  d1elpa2  amino acid (a.a.) range (SER123)(ARG169)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: EEEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (SER123)  (GLU128) E1
	  (GLY129)  (GLU135) E2
	  (ARG142)  (PRO148) E3
	  (GLY149)  (ARG153) E4
	  (ARG153)  (GLY158) H5
	  (GLY165)  (ARG169) E6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                        
E2      144.0°   E2                                 
E3      -59.5°  155.3°   E3                          
E4      165.2°   21.4° -134.6°   E4                   
H5       50.7° -103.7°  100.0°  120.7°   H5            
E6      -21.6°  162.0°  -42.6°  171.6°   58.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.0°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4jgfb_ :   (HIS121)  (ARG168)   [view usage] : b.11.1.0 |gamma-Crystallin-like |gamma-Crystallin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2m3ua1 :    (ILE40)   (GLY91)   [view usage] : b.11.1.0 |gamma-Crystallin-like |gamma-Crystallin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1elpa2 :   (SER123)  (ARG169)   [view usage] : b.11.1.1 |gamma-Crystallin-like |gamma-Crystallin-like |Crystallins/Ca-binding development proteins |gamma-Crystallin |Cow (Bos taurus), isoform IIIb (D) [TaxId: 9913]
 d2kfba1 :    (ASN34)   (HIS84)   [view usage] : b.11.1.1 |gamma-Crystallin-like |gamma-Crystallin-like |Crystallins/Ca-binding development proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1i5ia2 :   (SER123)  (ARG169)   [view usage] : b.11.1.1 |gamma-Crystallin-like |gamma-Crystallin-like |Crystallins/Ca-binding development proteins |gamma-Crystallin |Cow (Bos taurus), isoform II (B) [TaxId: 9913]
 d2g98a2 :   (SER122)  (ASP171)   [view usage] : b.11.1.1 |gamma-Crystallin-like |gamma-Crystallin-like |Crystallins/Ca-binding development proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4gr7a_ :   (SER122)  (ARG168)   [view usage] : b.11.1.0 |gamma-Crystallin-like |gamma-Crystallin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2m3ca2 :   (HIS123)  (THR172)   [view usage] : b.11.1.0 |gamma-Crystallin-like |gamma-Crystallin-like |automated matches |automated matches |Zebrafish (Danio rerio) [TaxId: 7955]
 d1h4ax2 :   (SER123)  (SER174)   [view usage] : b.11.1.1 |gamma-Crystallin-like |gamma-Crystallin-like |Crystallins/Ca-binding development proteins |gamma-Crystallin |Human (Homo sapiens), isoform D [TaxId: 9606]
 d3qk3b_ :   (SER150)  (ARG196)   [view usage] : b.11.1.0 |gamma-Crystallin-like |gamma-Crystallin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.11