Protein Concepts Dictionary

Tableau information

Concept source:  d4l59a1  amino acid (a.a.) range (SER279)(PRO331)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: EEEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (SER279)  (VAL283) E1
	  (VAL283)  (GLY291) E2
	  (TYR292)  (PHE298) E3
	  (TYR305)  (ASN310) E4
	  (GLY320)  (GLY326) H5
	  (HIS327)  (PRO331) E6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                        
E2      -81.4°   E2                                 
E3       90.6°  151.3°   E3                          
E4      -94.3°  -52.6°  156.1°   E4                   
H5     -138.7°  124.0°  -79.3°   81.6°   H5            
E6      -48.0°   89.1°   65.7° -132.5° -145.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1oi1a2 :   (TYR187)  (PRO240)   [view usage] : b.34.9.3 |SH3-like barrel |Tudor/PWWP/MBT |MBT repeat |Scml2 protein |Human (Homo sapiens) [TaxId: 9606]
 d3p8hb1 :   (SER253)  (PRO305)   [view usage] : b.34.9.0 |SH3-like barrel |Tudor/PWWP/MBT |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2bivb2 :   (TYR187)  (PRO239)   [view usage] : b.34.9.0 |SH3-like barrel |Tudor/PWWP/MBT |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3ut1a1 :   (SER279)  (PRO332)   [view usage] : b.34.9.0 |SH3-like barrel |Tudor/PWWP/MBT |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1oyxa1 :   (SER253)  (PRO305)   [view usage] : b.34.9.3 |SH3-like barrel |Tudor/PWWP/MBT |MBT repeat |Lethal(3)malignant brain tumor-like protein |Human (Homo sapiens) [TaxId: 9606]
 d2vytb2 :   (TYR187)  (PRO239)   [view usage] : b.34.9.3 |SH3-like barrel |Tudor/PWWP/MBT |MBT repeat |Scml2 protein |Human (Homo sapiens) [TaxId: 9606]
 d2biva2 :   (TYR187)  (PRO239)   [view usage] : b.34.9.0 |SH3-like barrel |Tudor/PWWP/MBT |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4l59a1 :   (SER279)  (PRO331)   [view usage] : b.34.9.0 |SH3-like barrel |Tudor/PWWP/MBT |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2bivc2 :   (TYR187)  (PRO239)   [view usage] : b.34.9.0 |SH3-like barrel |Tudor/PWWP/MBT |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.34