Protein Concepts Dictionary

Tableau information

Concept source:  d2rlca_  amino acid (a.a.) range (GLU271)(LYS318)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: EEEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLU271)  (THR276) E1
	  (THR279)  (CYS283) E2
	  (GLY287)  (THR293) E3
	  (GLN298)  (ASP303) E4
	  (ASP303)  (ASN308) H5
	  (ILE314)  (LYS318) E6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                        
E2      -18.3°   E2                                 
E3      144.8°  163.1°   E3                          
E4      -55.3°  -37.0°  159.0°   E4                   
H5      -81.1°  -67.9°  121.0°  -43.3°   H5            
E6      114.2°  132.5°  -30.7°  166.3°  131.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2rf8b_ :   (GLU271)  (LYS318)   [view usage] : d.153.1.0 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |automated matches |automated matches |Clostridium perfringens [TaxId: 1502]
 d2rf8a_ :   (GLU271)  (LYS318)   [view usage] : d.153.1.0 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |automated matches |automated matches |Clostridium perfringens [TaxId: 1502]
 d2pvaa_ :   (GLY271)  (ARG321)   [view usage] : d.153.1.3 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Penicillin V acylase |Penicillin V acylase |Bacillus sphaericus [TaxId: 1421]
 d2rg2a_ :   (GLU271)  (LYS318)   [view usage] : d.153.1.0 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |automated matches |automated matches |Clostridium perfringens [TaxId: 1502]
 d2bjfa_ :   (GLU271)  (LYS318)   [view usage] : d.153.1.0 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |automated matches |automated matches |Clostridium perfringens [TaxId: 1502]
 d2quyf_ :   (GLY271)  (ARG321)   [view usage] : d.153.1.0 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |automated matches |automated matches |Bacillus sphaericus [TaxId: 1421]
 d2quya_ :   (GLY271)  (ARG321)   [view usage] : d.153.1.0 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |automated matches |automated matches |Bacillus sphaericus [TaxId: 1421]
 d3pvaa_ :   (GLY271)  (ARG321)   [view usage] : d.153.1.3 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Penicillin V acylase |Penicillin V acylase |Bacillus sphaericus [TaxId: 1421]
 d2iwma_ :   (GLY274)  (ARG324)   [view usage] : d.153.1.3 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Penicillin V acylase |automated matches |Bacillus sphaericus [TaxId: 1421]
 d2iwmc_ :   (GLY274)  (ARG324)   [view usage] : d.153.1.3 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Penicillin V acylase |automated matches |Bacillus sphaericus [TaxId: 1421]
 d2rlca_ :   (GLU271)  (LYS318)   [view usage] : d.153.1.0 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |automated matches |automated matches |Clostridium perfringens [TaxId: 1502]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.153