Protein Concepts Dictionary

Tableau information

Concept source:  d3lvba1  amino acid (a.a.) range (THR35)(TYR118)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: EEEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (THR35)   (VAL45) E1
	   (GLY51)   (GLY61) E2
	   (GLY69)   (ILE75) E3
	   (ASN89)   (SER94) E4
	  (GLY101)  (PHE104) H5
	  (ARG107)  (TYR118) E6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                        
E2      152.7°   E2                                 
E3     -111.5°   89.4°   E3                          
E4       61.1°  -92.5°  155.7°   E4                   
H5       59.1°  -94.0° -150.7°    5.1°   H5            
E6      -56.3°  150.7°  -65.0°  116.6° -115.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.5°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1b2ra1 :    (ILE22)   (CYS98)   [view usage] : b.43.4.2 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |Ferredoxin reductase FAD-binding domain-like |Ferredoxin reductase (flavodoxin reductase) N-terminal domain |Anabaena sp., pcc 7119 [TaxId: 1167]
 d3lvba1 :    (THR35)  (TYR118)   [view usage] : b.43.4.0 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |automated matches |automated matches |Maize (Zea mays) [TaxId: 4577]
 d3zbua1 :    (ILE22)   (CYS98)   [view usage] : b.43.4.2 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |Ferredoxin reductase FAD-binding domain-like |automated matches |Nostoc sp. [TaxId: 1168]
 d1go2a1 :    (ILE22)   (CYS98)   [view usage] : b.43.4.2 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |Ferredoxin reductase FAD-binding domain-like |Ferredoxin reductase (flavodoxin reductase) N-terminal domain |Anabaena sp., pcc 7119 [TaxId: 1167]
 d1jb9a1 :    (THR35)  (TYR118)   [view usage] : b.43.4.2 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |Ferredoxin reductase FAD-binding domain-like |Ferredoxin reductase (flavodoxin reductase) N-terminal domain |Maize (Zea mays), root isoform [TaxId: 4577]
 d2xnca1 :    (LEU37)  (PRO113)   [view usage] : b.43.4.0 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |automated matches |automated matches |Pea (Pisum sativum) [TaxId: 3888]
 d3zbta1 :    (ILE22)   (CYS98)   [view usage] : b.43.4.2 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |Ferredoxin reductase FAD-binding domain-like |automated matches |Nostoc sp. [TaxId: 1168]
 d3lo8a1 :    (THR35)  (TYR118)   [view usage] : b.43.4.0 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |automated matches |automated matches |Maize (Zea mays) [TaxId: 4577]
 d2xncb1 :    (LEU37)  (PRO113)   [view usage] : b.43.4.0 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |automated matches |automated matches |Pea (Pisum sativum) [TaxId: 3888]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.43