Protein Concepts Dictionary

Tableau information

Concept source:  d1bnza_  amino acid (a.a.) range (ALA2)(GLN62)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: EEEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ALA2)    (LYS7) E1
	   (GLU12)   (ASP16) E2
	   (LYS21)   (ARG25) E3
	   (LYS28)   (TYR34) E4
	   (GLY39)   (SER47) E5
	   (LYS53)   (GLN62) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                        
E2      159.4°   E2                                 
E3       62.4° -120.4°   E3                          
E4     -108.3°   65.1°  167.5°   E4                   
E5       79.5° -112.3°  -28.1°  163.9°   E5            
H6      -92.0°   68.8°  -84.7°   87.3° -106.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.0°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1wtra_ :     (MET1)   (GLU64)   [view usage] : b.34.13.1 |SH3-like barrel |Chromo domain-like |"Histone-like" proteins from archaea |automated matches |Sulfolobus acidocaldarius [TaxId: 2285]
 d1wtpb_ :     (VAL2)   (LYS65)   [view usage] : b.34.13.1 |SH3-like barrel |Chromo domain-like |"Histone-like" proteins from archaea |automated matches |Sulfolobus acidocaldarius [TaxId: 2285]
 d1wd1a_ :     (VAL2)   (GLU64)   [view usage] : b.34.13.1 |SH3-like barrel |Chromo domain-like |"Histone-like" proteins from archaea |DNA-binding protein |Sulfolobus acidocaldarius, Sac7d [TaxId: 2285]
 d1ca5a_ :     (VAL2)   (GLU64)   [view usage] : b.34.13.1 |SH3-like barrel |Chromo domain-like |"Histone-like" proteins from archaea |DNA-binding protein |Sulfolobus acidocaldarius, Sac7d [TaxId: 2285]
 d1bnza_ :     (ALA2)   (GLN62)   [view usage] : b.34.13.1 |SH3-like barrel |Chromo domain-like |"Histone-like" proteins from archaea |DNA-binding protein |Sulfolobus acidocaldarius, Sac7d [TaxId: 2285]
 d1wvla_ :     (MET1)   (GLU78)   [view usage] : b.34.13.1 |SH3-like barrel |Chromo domain-like |"Histone-like" proteins from archaea |automated matches |Sulfolobus acidocaldarius [TaxId: 2285]
 d2xiwa_ :     (VAL2)   (LYS65)   [view usage] : b.34.13.1 |SH3-like barrel |Chromo domain-like |"Histone-like" proteins from archaea |automated matches |Sulfolobus acidocaldarius [TaxId: 2285]
 d1wtwa_ :     (MET1)   (ARG63)   [view usage] : b.34.13.1 |SH3-like barrel |Chromo domain-like |"Histone-like" proteins from archaea |automated matches |Sulfolobus acidocaldarius [TaxId: 2285]
 d1bf4a_ :     (ALA2)   (LYS61)   [view usage] : b.34.13.1 |SH3-like barrel |Chromo domain-like |"Histone-like" proteins from archaea |DNA-binding protein |Sulfolobus solfataricus, Sso7d [TaxId: 2287]
 d1jica_ :     (ALA1)   (LEU58)   [view usage] : b.34.13.1 |SH3-like barrel |Chromo domain-like |"Histone-like" proteins from archaea |DNA-binding protein |Sulfolobus solfataricus, Sso7d [TaxId: 2287]
 d2xiwb_ :     (VAL2)   (LYS66)   [view usage] : b.34.13.1 |SH3-like barrel |Chromo domain-like |"Histone-like" proteins from archaea |automated matches |Sulfolobus acidocaldarius [TaxId: 2285]
 d2cvra_ :     (ALA1)   (LYS60)   [view usage] : b.34.13.1 |SH3-like barrel |Chromo domain-like |"Histone-like" proteins from archaea |DNA-binding protein |Sulfolobus solfataricus, Sso7d [TaxId: 2287]
 d1wtva_ :     (VAL2)   (ARG63)   [view usage] : b.34.13.1 |SH3-like barrel |Chromo domain-like |"Histone-like" proteins from archaea |automated matches |Sulfolobus acidocaldarius [TaxId: 2285]
 d1azpa_ :     (MET1)   (ARG63)   [view usage] : b.34.13.1 |SH3-like barrel |Chromo domain-like |"Histone-like" proteins from archaea |DNA-binding protein |Sulfolobus acidocaldarius, Sac7d [TaxId: 2285]
 d1wtoa_ :     (VAL2)   (GLU64)   [view usage] : b.34.13.1 |SH3-like barrel |Chromo domain-like |"Histone-like" proteins from archaea |automated matches |Sulfolobus acidocaldarius [TaxId: 2285]
 d1xyia_ :     (MET1)   (ARG63)   [view usage] : b.34.13.1 |SH3-like barrel |Chromo domain-like |"Histone-like" proteins from archaea |automated matches |Sulfolobus acidocaldarius [TaxId: 2285]
 d1bbxc_ :     (THR2)   (LYS63)   [view usage] : b.34.13.1 |SH3-like barrel |Chromo domain-like |"Histone-like" proteins from archaea |DNA-binding protein |Sulfolobus solfataricus, Sso7d [TaxId: 2287]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.34