Protein Concepts Dictionary

Tableau information

Concept source:  d2cdea2  amino acid (a.a.) range (ALA122)(ASN192)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: EEEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ALA122)  (ASP128) E1
	  (ASP133)  (PHE139) E2
	  (VAL156)  (MET166) E3
	  (ASP170)  (ASN174) E4
	  (SER175)  (ASN181) E5
	  (ALA186)  (ASN192) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                        
E2      155.7°   E2                                 
E3      103.8°  -57.4°   E3                          
E4      -84.6°  112.7° -169.4°   E4                   
E5      -48.5°  152.9°  149.5°   40.7°   E5            
H6      124.8°  -46.0°  -86.5°   83.4°  118.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1qrnd2 :   (ASN120)  (ASN194)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |T-cell antigen receptor |Human (Homo sapiens), alpha-chain [TaxId: 9606]
 d2wbjc2 :   (ASN116)  (ASN190)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1ogad2 :   (ALA119)  (ASN189)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |T-cell antigen receptor |Human (Homo sapiens), alpha-chain [TaxId: 9606]
 d2bnqd2 :   (ASN118)  (ASN192)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |T-cell antigen receptor |Human (Homo sapiens), alpha-chain [TaxId: 9606]
 d2ak4d2 :   (ASN120)  (ASN194)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |T-cell antigen receptor |Human (Homo sapiens), alpha-chain [TaxId: 9606]
 d4grmc2 :   (ALA124)  (PHE193)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2f54d2 :   (ASN117)  (ASN191)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |T-cell antigen receptor |Human (Homo sapiens), alpha-chain [TaxId: 9606]
 d2cdea2 :   (ALA122)  (ASN192)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |T-cell antigen receptor |Human (Homo sapiens), alpha-chain [TaxId: 9606]
 d2f53d2 :   (ALA121)  (ASN191)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |T-cell antigen receptor |Human (Homo sapiens), alpha-chain [TaxId: 9606]
 d4eura2 :   (ASN116)  (ILE193)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3qh3a2 :   (ALA118)  (ILE191)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   b.1