Tableau information
Concept source: d2r5pa_ amino acid (a.a.) range (GLY52)(GLY94)
nSSEs in this Concept: 6
String of secondary struct.elems. (SSEs) defining this concept: EEEEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY52) (GLN61) E1
(ILE62) (CYS67) E2
(LYS69) (GLY73) E3
(GLY73) (GLY78) E4
(VAL82) (GLY86) E5
(GLY86) (GLY94) H6
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -92.5° E2
E3 -106.6° 159.0° E3
E4 142.2° 99.7° -70.5° E4
E5 -57.5° -97.4° 86.1° 152.5° E5
H6 41.9° -54.2° 139.6° -149.2° -57.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.3° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2nxda_ : (GLY52) (ILE93) [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |Human immunodeficiency virus type 1 protease |Hiv-1 m:b_arv2/sf2 [TaxId: 11685]
d2haha_ : (GLY61) (ASN111) [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |automated matches |Feline immunodeficiency virus (isolate petaluma) [TaxId: 11674]
d1ytia_ : (GLY52) (GLY94) [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |Simian immunodeficiency virus (SIV) protease |Simian immunodeficiency virus, different strains [TaxId: 11723]
d2qhca_ : (ARG57) (ILE93) [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |Human immunodeficiency virus type 1 protease |Human immunodeficiency virus type 1 [TaxId: 11676]
d4dqfb_ : (GLY52) (GLY94) [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |Human immunodeficiency virus type 1 protease |Human immunodeficiency virus type 1 [TaxId: 11676]
d2f3ka_ : (ARG57) (ILE93) [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |automated matches |Human immunodeficiency virus 1 [TaxId: 11676]
d1b11a_ : (GLY61) (ASN111) [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |Feline immunodeficiency virus (FIV) protease |Feline immunodeficiency virus [TaxId: 11673]
d6fiva_ : (GLY61) (ASN111) [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |Feline immunodeficiency virus (FIV) protease |Feline immunodeficiency virus [TaxId: 11673]
d1q9pa_ : (VAL56) (ILE93) [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |Human immunodeficiency virus type 1 protease |Human immunodeficiency virus type 1 [TaxId: 11676]
d3ogpa_ : (GLY61) (ASN111) [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |automated matches |Feline immunodeficiency virus [TaxId: 11673]
d1a94a_ : (ARG57) (GLY94) [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |Human immunodeficiency virus type 1 protease |Human immunodeficiency virus type 1 [TaxId: 11676]
d4qgib_ : (ARG57) (ILE93) [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |Human immunodeficiency virus type 1 protease |Human immunodeficiency virus type 1 lw12.3 isolate [TaxId: 82834]
d3ggua_ : (GLY52) (GLY94) [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |Human immunodeficiency virus type 1 protease |Human immunodeficiency virus type 1 (bru isolate) [TaxId: 11686]
d3el9a_ : (ARG57) (ILE93) [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |automated matches |Hiv-1 m:b_arv2/sf2 [TaxId: 11685]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.50