Protein Concepts Dictionary

Tableau information

Concept source:  d1b07a_  amino acid (a.a.) range (GLU135)(ASP174)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: EEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLU135)  (PHE141) E1
	  (PHE141)  (GLY145) E2
	  (GLU149)  (LYS154) E3
	  (ASP157)  (ARG162) E4
	  (ARG162)  (GLU166) E5
	  (TRP170)  (ASP174) E6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                        
E2      -95.4°   E2                                 
E3      -65.5° -146.2°   E3                          
E4      140.1°   59.7° -150.6°   E4                   
E5       64.2°   87.3° -106.6°  -82.7°   E5            
E6      -85.4°  -95.3°   57.4°  124.5° -149.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.0°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1uhfa_ :    (GLU10)   (GLY48)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Intersectin 2 (KIAA1256) |Human (Homo sapiens) [TaxId: 9606]
 d1j3ta_ :    (LEU11)   (HIS50)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Intersectin 2 (KIAA1256) |Human (Homo sapiens) [TaxId: 9606]
 d2egca_ :     (LEU9)   (GLY52)   [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2feia_ :     (ARG2)   (ASN42)   [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1ov3a2 :   (PRO230)  (ASP269)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |p47pox (neutrophil cytosolic factor 1) |Human (Homo sapiens) [TaxId: 9606]
 d1t3la1 :    (PHE63)  (LYS111)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |SH3-like domain of the L-type calcium channel |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d2egaa_ :     (GLU9)   (SER49)   [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2a08b_ :     (ALA6)   (ASN48)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1ueca2 :   (PRO230)  (ASP269)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |p47pox (neutrophil cytosolic factor 1) |Human (Homo sapiens) [TaxId: 9606]
 d2xmfa_ :     (PRO0)   (ARG40)   [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d2yupa_ :    (GLY18)   (GLY59)   [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1m30a_ :   (GLU135)  (GLU176)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |C-Crk, N-terminal SH3 domain |Mouse (Mus musculus) [TaxId: 10090]
 d2js0a_ :     (MET5)   (ASN45)   [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3rbbb_ :    (ASP80)  (SER119)   [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2l0aa_ :    (ARG18)   (HIS58)   [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2i0na_ :    (LYS11)   (ASN52)   [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Slime mold (Dictyostelium discoideum) [TaxId: 44689]
 d3rbbd_ :    (ASP80)  (SER119)   [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1hjda_ :    (SER23)   (GLY67)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Melanoma inhibitory activity protein |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.34