Protein Concepts Dictionary

Tableau information

Concept source:  d3sbpg1  amino acid (a.a.) range (HIS129)(PHE197)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: EEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (HIS129)  (ASP137) E1
	  (LEU145)  (ALA151) E2
	  (ARG154)  (ARG159) E3
	  (ASP166)  (THR170) E4
	  (GLY179)  (VAL185) E5
	  (VAL191)  (PHE197) E6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                        
E2      149.7°   E2                                 
E3      -50.3°  157.9°   E3                          
E4      117.9°  -34.6°  167.5°   E4                   
E5        4.5°  154.0°  -46.4°  121.6°   E5            
E6      150.7°  -12.3°  158.0°  -33.0°  154.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1nr0a2 :   (LEU415)  (GLY466)   [view usage] : b.69.4.1 |7-bladed beta-propeller |WD40 repeat-like |WD40-repeat |Actin interacting protein 1 |Nematode (Caenorhabditis elegans) [TaxId: 6239]
 d1yfqa_ :   (PHE154)  (SER213)   [view usage] : b.69.4.2 |7-bladed beta-propeller |WD40 repeat-like |Cell cycle arrest protein BUB3 |Cell cycle arrest protein BUB3 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d2iwfa1 :    (HIS93)  (ASP161)   [view usage] : b.69.3.1 |7-bladed beta-propeller |Nitrous oxide reductase, N-terminal domain |Nitrous oxide reductase, N-terminal domain |automated matches |Achromobacter cycloclastes [TaxId: 223]
 d3sbpg1 :   (HIS129)  (PHE197)   [view usage] : b.69.3.1 |7-bladed beta-propeller |Nitrous oxide reductase, N-terminal domain |Nitrous oxide reductase, N-terminal domain |automated matches |Pseudomonas stutzeri [TaxId: 316]
 d3sbpa1 :   (HIS129)  (PHE197)   [view usage] : b.69.3.1 |7-bladed beta-propeller |Nitrous oxide reductase, N-terminal domain |Nitrous oxide reductase, N-terminal domain |automated matches |Pseudomonas stutzeri [TaxId: 316]
 d1fwxa2 :    (HIS79)  (ASP147)   [view usage] : b.69.3.1 |7-bladed beta-propeller |Nitrous oxide reductase, N-terminal domain |Nitrous oxide reductase, N-terminal domain |Nitrous oxide reductase, N-terminal domain |Paracoccus denitrificans [TaxId: 266]
 d1fwxd2 :    (HIS79)  (ASP147)   [view usage] : b.69.3.1 |7-bladed beta-propeller |Nitrous oxide reductase, N-terminal domain |Nitrous oxide reductase, N-terminal domain |Nitrous oxide reductase, N-terminal domain |Paracoccus denitrificans [TaxId: 266]
 d1qnia2 :    (HIS79)  (PHE147)   [view usage] : b.69.3.1 |7-bladed beta-propeller |Nitrous oxide reductase, N-terminal domain |Nitrous oxide reductase, N-terminal domain |Nitrous oxide reductase, N-terminal domain |Pseudomonas nautica [TaxId: 2743]
 d3muna1 :   (ASP129)  (SER188)   [view usage] : b.69.7.0 |7-bladed beta-propeller |Peptidase/esterase 'gauge' domain |automated matches |automated matches |Aeromonas punctata [TaxId: 648]
 d1q7fb_ :   (GLY962) (SER1019)   [view usage] : b.68.9.1 |6-bladed beta-propeller |NHL repeat |NHL repeat |Brain tumor cg10719-pa |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
 d1q7fa_ :   (GLY962) (SER1019)   [view usage] : b.68.9.1 |6-bladed beta-propeller |NHL repeat |NHL repeat |Brain tumor cg10719-pa |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
 d1fwxb2 :    (HIS79)  (ASP147)   [view usage] : b.69.3.1 |7-bladed beta-propeller |Nitrous oxide reductase, N-terminal domain |Nitrous oxide reductase, N-terminal domain |Nitrous oxide reductase, N-terminal domain |Paracoccus denitrificans [TaxId: 266]
 d3sbpd1 :   (HIS129)  (PHE197)   [view usage] : b.69.3.1 |7-bladed beta-propeller |Nitrous oxide reductase, N-terminal domain |Nitrous oxide reductase, N-terminal domain |automated matches |Pseudomonas stutzeri [TaxId: 316]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.68,    b.69