Protein Concepts Dictionary

Tableau information

Concept source:  d1jnya2  amino acid (a.a.) range (ARG329)(GLN382)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: EEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ARG329)  (TRP334) E1
	  (THR337)  (ASN341) E2
	  (PRO345)  (HIS350) E3
	  (THR351)  (ALA355) E4
	  (ALA355)  (GLU360) E5
	  (GLN378)  (GLN382) E6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                        
E2      146.5°   E2                                 
E3      120.1°  -77.9°   E3                          
E4      -74.2°   88.5°  165.5°   E4                   
E5     -115.2°  -79.0°  109.7°  -61.9°   E5            
E6      -62.1°  136.3°   60.3° -134.1°  124.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1ttta2 :   (SER319)  (PRO364)   [view usage] : b.44.1.1 |Elongation factor/aminomethyltransferase common domain |EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain |EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain |Elongation factor Tu (EF-Tu) |Thermus aquaticus [TaxId: 271]
 d4c0sa3 :   (GLN343)  (SER396)   [view usage] : b.44.1.0 |Elongation factor/aminomethyltransferase common domain |EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain |automated matches |automated matches |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d1jnya2 :   (ARG329)  (GLN382)   [view usage] : b.44.1.1 |Elongation factor/aminomethyltransferase common domain |EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain |EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain |Elongation factor eEF-1alpha, C-terminal domain |Sulfolobus solfataricus [TaxId: 2287]
 d1jnyb2 :   (ARG329)  (GLN382)   [view usage] : b.44.1.1 |Elongation factor/aminomethyltransferase common domain |EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain |EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain |Elongation factor eEF-1alpha, C-terminal domain |Sulfolobus solfataricus [TaxId: 2287]
 d1d2ea2 :   (GLN355)  (GLY401)   [view usage] : b.44.1.1 |Elongation factor/aminomethyltransferase common domain |EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain |EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain |Elongation factor Tu (EF-Tu) |Cow (Bos taurus), mitochondrial [TaxId: 9913]
 d1aipa2 :   (ALA318)  (PRO364)   [view usage] : b.44.1.1 |Elongation factor/aminomethyltransferase common domain |EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain |EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain |Elongation factor Tu (EF-Tu) |Thermus thermophilus [TaxId: 274]
 d1b23p2 :   (ALA318)  (PRO364)   [view usage] : b.44.1.1 |Elongation factor/aminomethyltransferase common domain |EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain |EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain |Elongation factor Tu (EF-Tu) |Thermus aquaticus [TaxId: 271]
 d2fx3a2 :   (SER306)  (PRO352)   [view usage] : b.44.1.1 |Elongation factor/aminomethyltransferase common domain |EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain |EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain |Elongation factor Tu (EF-Tu) |Escherichia coli [TaxId: 562]
 d4c0sb3 :   (GLN343)  (SER396)   [view usage] : b.44.1.0 |Elongation factor/aminomethyltransferase common domain |EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain |automated matches |automated matches |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d1xb2a2 :   (ALA354)  (GLY401)   [view usage] : b.44.1.1 |Elongation factor/aminomethyltransferase common domain |EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain |EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain |Elongation factor Tu (EF-Tu) |Cow (Bos taurus), mitochondrial [TaxId: 9913]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.44