Protein Concepts Dictionary

Tableau information

Concept source:  d2cdfa2  amino acid (a.a.) range (ALA122)(ASN181)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: EEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ALA122)  (ASP128) E1
	  (ASP133)  (PHE139) E2
	  (ASP155)  (THR159) E3
	  (ASP160)  (MET166) E4
	  (ASP170)  (ASN174) E5
	  (SER175)  (ASN181) E6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                        
E2      154.3°   E2                                 
E3      113.5°  -43.5°   E3                          
E4       87.4°  -79.3°   43.3°   E4                   
E5      -83.9°  112.4° -149.9°  166.7°   E5            
E6      -49.3°  152.1°  162.7°  127.4°   40.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.9°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3qeqd2 :   (ALA116)  (ASN175)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2bnua2 :   (ASN118)  (ASN181)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2gj6d2 :   (TYR126)  (ASN183)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |T-cell antigen receptor |Mouse (Mus musculus), alpha-chain [TaxId: 10090]
 d1kgcd2 :   (ASN120)  (ASN183)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |T-cell antigen receptor |Human (Homo sapiens), alpha-chain [TaxId: 9606]
 d2cdfa2 :   (ALA122)  (ASN181)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3c5za2 :   (LYS127)  (ASN178)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d2pyfa2 :   (ASN118)  (ASN181)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3pl6c2 :   (ALA120)  (ASN179)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   b.1