Tableau information
Concept source: d2a73a2 amino acid (a.a.) range (SER121)(GLU204)
nSSEs in this Concept: 6
String of secondary struct.elems. (SSEs) defining this concept: EEEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER121) (ASN131) E1
(THR140) (GLU146) E2
(VAL153) (GLN161) E3
(GLY165) (GLU175) E4
(GLY180) (TYR188) E5
(GLN193) (GLU204) E6
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 147.1° E2
E3 -40.1° 157.8° E3
E4 156.3° -20.8° 163.5° E4
E5 -28.1° 167.9° -33.2° 153.5° E5
E6 162.9° -34.0° 130.4° -35.5° 156.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2ahna_ : (THR2) (PRO96) [view usage] : b.25.1.0 |Osmotin, thaumatin-like protein |Osmotin, thaumatin-like protein |automated matches |automated matches |Prunus avium [TaxId: 42229]
d2bena_ : (ASN104) (LYS197) [view usage] : b.1.18.2 |Immunoglobulin-like beta-sandwich |E set domains |E-set domains of sugar-utilizing enzymes |Chitin-binding protein CBP21 |Serratia marcescens [TaxId: 615]
d2l38a_ : (SER28) (VAL104) [view usage] : b.97.1.1 |Cytolysin/lectin |Cytolysin/lectin |Anemone pore-forming cytolysin |Sticholysin II |Carribean sea anemone (Stoichactis helianthus) [TaxId: 6123]
d1ajwa_ : (ARG111) (LYS200) [view usage] : b.1.18.8 |Immunoglobulin-like beta-sandwich |E set domains |RhoGDI-like |Rho GDP-dissociation inhibitor 1, RhoGDI |Cow (Bos taurus) [TaxId: 9913]
d2cuma1 : (ARG22) (LEU97) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Tenascin-X |Human (Homo sapiens) [TaxId: 9606]
d2y6ja_ : (VAL84) (VAL165) [view usage] : b.18.1.14 |Galactose-binding domain-like |Galactose-binding domain-like |CBM4/9 |automated matches |Rhodothermus marinus [TaxId: 29549]
d1adwa_ : (ASP29) (GLY93) [view usage] : b.6.1.1 |Cupredoxin-like |Cupredoxins |Plastocyanin/azurin-like |Pseudoazurin |Thiosphaera pantotropha [TaxId: 82367]
d2bema_ : (PRO103) (LYS197) [view usage] : b.1.18.2 |Immunoglobulin-like beta-sandwich |E set domains |E-set domains of sugar-utilizing enzymes |Chitin-binding protein CBP21 |Serratia marcescens [TaxId: 615]
d1xpwa_ : (GLU60) (GLY135) [view usage] : b.18.1.9 |Galactose-binding domain-like |Galactose-binding domain-like |APC10-like |Placental protein 25, pp25 |Human (Homo sapiens) [TaxId: 9606]
d1fhga_ : (CYS63) (MET135) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Telokin |Turkey (Meleagris gallopavo) [TaxId: 9103]
d2je8a1 : (ILE220) (GLY317) [view usage] : b.1.4.1 |Immunoglobulin-like beta-sandwich |beta-Galactosidase/glucuronidase domain |beta-Galactosidase/glucuronidase domain |Beta-mannosidase, domains 2, 4 and 5 |Bacteroides thetaiotaomicron [TaxId: 818]
d2cjsb_ : (LEU3) (PRO81) [view usage] : b.7.1.1 |C2 domain-like |C2 domain (Calcium/lipid-binding domain, CaLB) |PLC-like (P variant) |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2y64a_ : (VAL84) (VAL165) [view usage] : b.18.1.14 |Galactose-binding domain-like |Galactose-binding domain-like |CBM4/9 |automated matches |Rhodothermus marinus [TaxId: 29549]
d1c3ha_ : (TYR162) (LEU241) [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |30 kDa adipocyte complement-related protein |Mouse (Mus musculus) [TaxId: 10090]
d2yd4a1 : (GLY47) (THR122) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d1j8ka_ : (ILE18) (GLN88) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Fibronectin, different Fn3 modules |Human (Homo sapiens) [TaxId: 9606]
d4hbqa2 : (GLU109) (GLY203) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ncta_ : (SER16) (GLN90) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Titin |Human (Homo sapiens), different modules [TaxId: 9606]
d1qxfa_ : (HIS2) (GLU52) [view usage] : g.41.8.4 |Rubredoxin-like |Zn-binding ribosomal proteins |Ribosomal protein S27e |Ribosomal protein S27e |Archaeoglobus fulgidus [TaxId: 2234]
d2l2ba_ : (SER28) (PHE106) [view usage] : b.97.1.1 |Cytolysin/lectin |Cytolysin/lectin |Anemone pore-forming cytolysin |Sticholysin II |Carribean sea anemone (Stoichactis helianthus) [TaxId: 6123]
d1bqsa2 : (GLU109) (LEU202) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Mucosal addressin cell adhesion molecule-1 (MADCAM-1) |Human (Homo sapiens) [TaxId: 9606]
d1gsma2 : (GLU109) (ILE203) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Mucosal addressin cell adhesion molecule-1 (MADCAM-1) |Human (Homo sapiens) [TaxId: 9606]
d1paza_ : (ASP29) (GLY93) [view usage] : b.6.1.1 |Cupredoxin-like |Cupredoxins |Plastocyanin/azurin-like |Pseudoazurin |Alcaligenes faecalis, strain s-6 [TaxId: 511]
d1j1la_ : (TRP190) (GLU244) [view usage] : b.82.1.12 |Double-stranded beta-helix |RmlC-like cupins |Pirin-like |Pirin |Human (Homo sapiens) [TaxId: 9606]
d2bera3 : (LEU331) (LEU398) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |automated matches |Micromonospora viridifaciens [TaxId: 1881]
d3k6ia_ : (VAL21) (VAL97) [view usage] : b.1.6.0 |Immunoglobulin-like beta-sandwich |Cadherin-like |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d1ujxa_ : (ARG67) (SER118) [view usage] : b.26.1.2 |SMAD/FHA domain |SMAD/FHA domain |FHA domain |Polynucleotide kinase 3'-phosphatase |Mouse (Mus musculus) [TaxId: 10090]
d1ys5a1 : (GLY49) (ILE127) [view usage] : f.4.1.3 |Transmembrane beta-barrels |OMPA-like |GNA1870 immunodominant domain-like |Lipoprotein GNA1870 immunodominant domain |Neisseria meningitidis [TaxId: 487]
d1a9va_ : (PRO34) (THR123) [view usage] : b.1.18.7 |Immunoglobulin-like beta-sandwich |E set domains |ML domain |Major mite allergen |House-dust mite (Dermatophagoides pteronyssinus), Der p 2 [TaxId: 6956]
d2y6ka_ : (VAL84) (GLY161) [view usage] : b.18.1.14 |Galactose-binding domain-like |Galactose-binding domain-like |CBM4/9 |automated matches |Rhodothermus marinus [TaxId: 29549]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, b.82, f.4, b.18, b.6, b.1, b.26, b.22, b.25, b.97, b.7, g.41