Tableau information
Concept source: d1tg8a1 amino acid (a.a.) range (CYS333)(GLY395)
nSSEs in this Concept: 6
String of secondary struct.elems. (SSEs) defining this concept: EEEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(CYS333) (ILE339) E1
(LEU348) (THR353) E2
(ASN355) (GLU360) E3
(SER363) (ALA369) E4
(ASP375) (GLY381) E5
(GLN386) (GLY395) E6
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 143.4° E2
E3 134.3° 51.7° E3
E4 -31.2° 133.6° -164.9° E4
E5 164.2° -52.1° -46.2° 148.7° E5
E6 -44.8° 101.2° 131.1° -39.9° 150.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3vtta_ : (CYS611) (GLY673) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Dengue virus type 3 [TaxId: 408870]
d3t5ia_ : (PHE74) (VAL150) [view usage] : b.1.18.8 |Immunoglobulin-like beta-sandwich |E set domains |RhoGDI-like |GMP-PDE delta |Human (Homo sapiens) [TaxId: 9606]
d2bc4c2 : (THR132) (PRO193) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2jsfa_ : (CYS45) (ASN102) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Dengue virus [TaxId: 11060]
d1rv6x_ : (THR166) (ARG224) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Second domain of the Flt-1 receptor |Human (Homo sapiens) [TaxId: 9606]
d3t5gb_ : (PHE74) (VAL150) [view usage] : b.1.18.8 |Immunoglobulin-like beta-sandwich |E set domains |RhoGDI-like |GMP-PDE delta |Human (Homo sapiens) [TaxId: 9606]
d1yrka_ : (GLN25) (GLY87) [view usage] : b.7.1.1 |C2 domain-like |C2 domain (Calcium/lipid-binding domain, CaLB) |PLC-like (P variant) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2vh5l_ : (ASN36) (GLU107) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1tg8a1 : (CYS333) (GLY395) [view usage] : b.1.18.4 |Immunoglobulin-like beta-sandwich |E set domains |Class II viral fusion proteins C-terminal domain |Envelope glycoprotein |Dengue virus type 2 [TaxId: 11060]
d4l5fe_ : (CYS333) (LYS394) [view usage] : b.1.18.4 |Immunoglobulin-like beta-sandwich |E set domains |Class II viral fusion proteins C-terminal domain |automated matches |Dengue virus 1 [TaxId: 11053]
d4bz2a_ : (VAL335) (HIS395) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Dengue virus 4 [TaxId: 11070]
d1na8a_ : (VAL559) (GLN629) [view usage] : b.1.10.2 |Immunoglobulin-like beta-sandwich |Clathrin adaptor appendage domain |gamma-adaptin C-terminal appendage domain-like |ADP-ribosylation factor binding protein Gga1 domain |Human (Homo sapiens) [TaxId: 9606]
d1m06g_ : (TYR94) (GLN175) [view usage] : b.121.5.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |ssDNA viruses |Microviridae-like VP |Microvirus capsid proteins |Bacteriophage alpha3 [TaxId: 10849]
d4ffya_ : (CYS333) (GLY395) [view usage] : b.1.18.4 |Immunoglobulin-like beta-sandwich |E set domains |Class II viral fusion proteins C-terminal domain |automated matches |Dengue virus 1 [TaxId: 11053]
d1oana1 : (CYS333) (LYS394) [view usage] : b.1.18.4 |Immunoglobulin-like beta-sandwich |E set domains |Class II viral fusion proteins C-terminal domain |Envelope glycoprotein |Dengue virus type 2 [TaxId: 11060]
d1b09a_ : (LYS31) (GLU85) [view usage] : b.29.1.5 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Pentraxin (pentaxin) |C-reactive protein (CRP) |Human (Homo sapiens) [TaxId: 9606]
d3irca_ : (CYS333) (LYS394) [view usage] : b.1.18.4 |Immunoglobulin-like beta-sandwich |E set domains |Class II viral fusion proteins C-terminal domain |automated matches |Dengue virus 1 [TaxId: 11053]
d1ogpa1 : (VAL301) (ASN366) [view usage] : b.1.18.6 |Immunoglobulin-like beta-sandwich |E set domains |Molybdenum-containing oxidoreductases-like dimerisation domain |Sulfite oxidase, C-terminal domain |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.29, b.121, b.1, b.7