Protein Concepts Dictionary

Tableau information

Concept source:  d1ywhe2  amino acid (a.a.) range (LEU1)(GLY72)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: EEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (LEU1)    (LYS7) E1
	   (GLY10)   (VAL14) E2
	   (CYS24)   (GLU34) E3
	   (GLU36)   (SER44) E4
	   (ASN52)   (ARG58) E5
	   (THR64)   (GLY72) E6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                        
E2      157.7°   E2                                 
E3       23.4° -178.9°   E3                          
E4     -144.3°   15.4°  165.7°   E4                   
E5       25.0°  174.9°   -5.1°  163.0°   E5            
E6     -155.1°   -9.7°  169.9°  -22.1° -174.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2i9be2 :     (LEU1)   (GLY72)   [view usage] : g.7.1.3 |Snake toxin-like |Snake toxin-like |Extracellular domain of cell surface receptors |Urokinase plasminogen activator surface receptor uPAR |Human (Homo sapiens) [TaxId: 9606]
 d1ywhk2 :     (LEU1)   (GLY72)   [view usage] : g.7.1.3 |Snake toxin-like |Snake toxin-like |Extracellular domain of cell surface receptors |Urokinase plasminogen activator surface receptor uPAR |Human (Homo sapiens) [TaxId: 9606]
 d1ywhm2 :     (CYS3)   (GLY72)   [view usage] : g.7.1.3 |Snake toxin-like |Snake toxin-like |Extracellular domain of cell surface receptors |Urokinase plasminogen activator surface receptor uPAR |Human (Homo sapiens) [TaxId: 9606]
 d1ywhe2 :     (LEU1)   (GLY72)   [view usage] : g.7.1.3 |Snake toxin-like |Snake toxin-like |Extracellular domain of cell surface receptors |Urokinase plasminogen activator surface receptor uPAR |Human (Homo sapiens) [TaxId: 9606]
 d3u73u1 :     (LEU1)   (GLY72)   [view usage] : g.7.1.0 |Snake toxin-like |Snake toxin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1ywha2 :     (CYS3)   (GLY72)   [view usage] : g.7.1.3 |Snake toxin-like |Snake toxin-like |Extracellular domain of cell surface receptors |Urokinase plasminogen activator surface receptor uPAR |Human (Homo sapiens) [TaxId: 9606]
 d1ywhc2 :     (LEU1)   (GLY72)   [view usage] : g.7.1.3 |Snake toxin-like |Snake toxin-like |Extracellular domain of cell surface receptors |Urokinase plasminogen activator surface receptor uPAR |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   g.7