Tableau information
Concept source: d2bmob1 amino acid (a.a.) range (ARG115)(TYR180)
nSSEs in this Concept: 6
String of secondary struct.elems. (SSEs) defining this concept: EEEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ARG115) (THR121) E1
(ASN122) (LYS127) E2
(GLU133) (ARG147) E3
(GLN151) (GLU167) E4
(GLY169) (LEU173) E5
(VAL174) (TYR180) E6
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -66.7° E2
E3 140.1° -152.9° E3
E4 -61.1° -18.5° 156.2° E4
E5 104.2° 115.0° -62.0° 132.6° E5
E6 94.4° 144.0° -50.8° 153.0° -37.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2xsob_ : (ARG109) (LEU174) [view usage] : d.17.4.4 |Cystatin-like |NTF2-like |Ring hydroxylating beta subunit |automated matches |Burkholderia xenovorans [TaxId: 266265]
d2xr8b_ : (ARG109) (LEU174) [view usage] : d.17.4.4 |Cystatin-like |NTF2-like |Ring hydroxylating beta subunit |automated matches |Burkholderia xenovorans [TaxId: 266265]
d1wqlb1 : (ARG107) (LEU172) [view usage] : d.17.4.4 |Cystatin-like |NTF2-like |Ring hydroxylating beta subunit |Small subunit of cumene dioxygenase CumA2 |Pseudomonas fluorescens [TaxId: 294]
d1dila_ : (LYS34) (VAL91) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Salmonella sialidase |Salmonella typhimurium, strain lt2 [TaxId: 90371]
d1ulid_ : (ARG108) (ILE173) [view usage] : d.17.4.4 |Cystatin-like |NTF2-like |Ring hydroxylating beta subunit |Biphenyl dioxygenase small subunit BphA2 |Rhodococcus sp. RHA1 [TaxId: 101510]
d1eg9b_ : (ARG615) (TYR680) [view usage] : d.17.4.4 |Cystatin-like |NTF2-like |Ring hydroxylating beta subunit |Naphthalene 1,2-dioxygenase beta subunit |Pseudomonas putida [TaxId: 303]
d1j1ta_ : (GLY83) (SER145) [view usage] : b.29.1.18 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Alginate lyase |Alginate lyase |Alteromonas sp. [TaxId: 232]
d1l9mb2 : (SER481) (PRO544) [view usage] : b.1.5.1 |Immunoglobulin-like beta-sandwich |Transglutaminase, two C-terminal domains |Transglutaminase, two C-terminal domains |Transglutaminase, two C-terminal domains |Human (Homo sapiens), TGase E3 [TaxId: 9606]
d2ff4b3 : (ALA306) (ASP365) [view usage] : b.26.1.2 |SMAD/FHA domain |SMAD/FHA domain |FHA domain |Probable regulatory protein EmbR, C-terminal domain |Mycobacterium tuberculosis [TaxId: 1773]
d1jn5a_ : (SER67) (PHE135) [view usage] : d.17.4.2 |Cystatin-like |NTF2-like |NTF2-like |NTF2-related export protein 1 (p15) |Human (Homo sapiens) [TaxId: 9606]
d1ulib_ : (ARG108) (ILE173) [view usage] : d.17.4.4 |Cystatin-like |NTF2-like |Ring hydroxylating beta subunit |Biphenyl dioxygenase small subunit BphA2 |Rhodococcus sp. RHA1 [TaxId: 101510]
d1gff2_ : (TYR108) (GLN165) [view usage] : b.121.5.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |ssDNA viruses |Microviridae-like VP |Microvirus capsid proteins |Bacteriophage G4 [TaxId: 10843]
d2bmob1 : (ARG115) (TYR180) [view usage] : d.17.4.4 |Cystatin-like |NTF2-like |Ring hydroxylating beta subunit |Nitrobenzene dioxygenase beta subunit, NBDO-beta |Comamonas sp. JS765 [TaxId: 58226]
d1xbda_ : (SER250) (ASN292) [view usage] : b.2.2.1 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family II |Endo-1,4-beta xylanase D, xylan binding domain, XBD |Cellulomonas fimi [TaxId: 1708]
d1s6na_ : (ALA17) (VAL73) [view usage] : b.1.18.4 |Immunoglobulin-like beta-sandwich |E set domains |Class II viral fusion proteins C-terminal domain |Envelope glycoprotein |West Nile virus [TaxId: 11082]
d3pxma_ : (ASN35) (PRO92) [view usage] : d.17.1.1 |Cystatin-like |Cystatin/monellin |Monellin |automated matches |Serendipity berry (Dioscoreophyllum cumminsii) [TaxId: 3457]
d2h0pa_ : (GLY16) (ASN72) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Dengue virus 4 [TaxId: 11070]
d1jofa_ : (ASN144) (ASP190) [view usage] : b.69.10.1 |7-bladed beta-propeller |3-carboxy-cis,cis-mucoante lactonizing enzyme |3-carboxy-cis,cis-mucoante lactonizing enzyme |3-carboxy-cis,cis-mucoante lactonizing enzyme |Fungus (Neurospora crassa) [TaxId: 5141]
d3sila_ : (LYS34) (ASP89) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Salmonella sialidase |Salmonella typhimurium, strain lt2 [TaxId: 90371]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, b.69, b.29, b.121, b.2, b.1, d.17, b.26