Tableau information
Concept source: d3fa8a_ amino acid (a.a.) range (GLU69)(ARG136)
nSSEs in this Concept: 6
String of secondary struct.elems. (SSEs) defining this concept: EEEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLU69) (GLU73) E1
(LYS82) (TRP87) E2
(ASN91) (LYS101) E3
(LYS106) (GLU112) E4
(LEU119) (ALA125) E5
(ASP127) (ARG136) E6
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 126.2° E2
E3 -61.3° 166.3° E3
E4 111.8° -35.5° 157.4° E4
E5 -71.3° 136.2° -31.1° 171.5° E5
E6 99.3° -62.4° 130.3° -27.1° 161.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.2° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3lxbb2 : (GLN327) (TRP399) [view usage] : b.71.1.1 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |alpha-Amylases, C-terminal beta-sheet domain |Melibiase |Human (Homo sapiens) [TaxId: 9606]
d1crba_ : (GLU71) (HIS134) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Cellular retinol-binding protein II (CRBP) |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1t5la1 : (ILE186) (GLU239) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |Nucleotide excision repair enzyme UvrB |Bacillus caldotenax [TaxId: 1395]
d3f8aa_ : (GLU69) (ARG136) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Cellular retinoic-acid-binding protein (CRABP) |Human (Homo sapiens), CRABP-II [TaxId: 9606]
d3cwka_ : (GLU69) (VAL135) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Cellular retinoic-acid-binding protein (CRABP) |Human (Homo sapiens), CRABP-II [TaxId: 9606]
d3akna_ : (PHE68) (ILE127) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Intestinal fatty acid binding protein |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1frsa_ : (GLU5) (ASN87) [view usage] : d.85.1.1 |RNA bacteriophage capsid protein |RNA bacteriophage capsid protein |RNA bacteriophage capsid protein |fr coat protein |Bacteriophage FR [TaxId: 12017]
d1qbeb_ : (THR5) (PHE96) [view usage] : d.85.1.1 |RNA bacteriophage capsid protein |RNA bacteriophage capsid protein |RNA bacteriophage capsid protein |Qbeta coat protein |Bacteriophage Qbeta [TaxId: 39803]
d1icna_ : (PHE68) (LYS129) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Intestinal fatty acid binding protein |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3cr6a_ : (GLU69) (VAL133) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Cellular retinoic-acid-binding protein (CRABP) |Human (Homo sapiens), CRABP-II [TaxId: 9606]
d2fs6a_ : (GLU69) (ARG136) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Cellular retinoic-acid-binding protein (CRABP) |Human (Homo sapiens), CRABP-II [TaxId: 9606]
d3fa9a_ : (GLU69) (ARG136) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Cellular retinoic-acid-binding protein (CRABP) |Human (Homo sapiens), CRABP-II [TaxId: 9606]
d2quda_ : (LYS2) (VAL91) [view usage] : d.85.1.1 |RNA bacteriophage capsid protein |RNA bacteriophage capsid protein |RNA bacteriophage capsid protein |automated matches |Pseudomonas phage [TaxId: 12023]
d3vx0a2 : (ILE387) (VAL445) [view usage] : b.71.1.1 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |alpha-Amylases, C-terminal beta-sheet domain |Fungal alpha-amylase |Aspergillus oryzae, Taka-amylase [TaxId: 5062]
d1zi7a1 : (GLU107) (GLY183) [view usage] : d.338.1.1 |Oxysterol-binding protein-like |Oxysterol-binding protein-like |Oxysterol-binding protein |Oxysterol-binding protein homolog 4, KES1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3fa8a_ : (GLU69) (ARG136) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Cellular retinoic-acid-binding protein (CRABP) |Human (Homo sapiens), CRABP-II [TaxId: 9606]
d2guya1 : (ILE387) (GLY446) [view usage] : b.71.1.1 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |alpha-Amylases, C-terminal beta-sheet domain |Fungal alpha-amylase |Aspergillus oryzae, Taka-amylase [TaxId: 5062]
d2g78a_ : (GLU69) (PHE134) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Cellular retinoic-acid-binding protein (CRABP) |Human (Homo sapiens), CRABP-II [TaxId: 9606]
d2a6va1 : (ARG44) (ASP134) [view usage] : b.29.1.13 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Lectin leg-like |Emp46p N-terminal domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2a6xa1 : (ARG44) (ASP134) [view usage] : b.29.1.13 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Lectin leg-like |Emp46p N-terminal domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1fr5a_ : (GLU5) (PRO93) [view usage] : d.85.1.1 |RNA bacteriophage capsid protein |RNA bacteriophage capsid protein |RNA bacteriophage capsid protein |fr coat protein |Bacteriophage FR [TaxId: 12017]
d2g7ba_ : (GLU69) (TYR134) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Cellular retinoic-acid-binding protein (CRABP) |Human (Homo sapiens), CRABP-II [TaxId: 9606]
d1cbia_ : (GLU69) (ARG135) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Cellular retinoic-acid-binding protein (CRABP) |Cow and mouse (Bos taurus) and (Mus musculus), CRABP-I, identical sequences [TaxId: 9913]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.29, c.37, b.60, d.85, b.71, d.338