Protein Concepts Dictionary

Tableau information

Concept source:  d2x00b_  amino acid (a.a.) range (MET126)(PHE204)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: EEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (MET126)  (GLY131) E1
	  (ALA138)  (SER146) E2
	  (ILE154)  (THR160) E3
	  (LYS173)  (ARG183) E4
	  (VAL185)  (SER189) E5
	  (GLU193)  (PHE204) E6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                        
E2     -159.6°   E2                                 
E3      -23.1°  138.6°   E3                          
E4      132.1°  -39.7° -128.9°   E4                   
E5      117.5°  -80.0°  140.6°   71.8°   E5            
E6      -28.7°  151.6°   31.1°  159.3°  120.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.8°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3t4ma_ :   (MET126)  (PHE204)   [view usage] : b.96.1.0 |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |automated matches |automated matches |California sea hare (Aplysia californica) [TaxId: 6500]
 d3pmzf_ :   (MET126)  (PHE204)   [view usage] : b.96.1.0 |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |automated matches |automated matches |California sea hare (Aplysia californica) [TaxId: 6500]
 d2wnje_ :   (MET126)  (PHE204)   [view usage] : b.96.1.0 |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |automated matches |automated matches |California sea hare (Aplysia californica) [TaxId: 6500]
 d3sioa_ :   (MET126)  (PHE204)   [view usage] : b.96.1.0 |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |automated matches |automated matches |California sea hare (Aplysia californica) [TaxId: 6500]
 d2byrb_ :   (MET126)  (PHE204)   [view usage] : b.96.1.0 |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |automated matches |automated matches |California sea hare (Aplysia californica) [TaxId: 6500]
 d2x00b_ :   (MET126)  (PHE204)   [view usage] : b.96.1.0 |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |automated matches |automated matches |California sea hare (Aplysia californica) [TaxId: 6500]
 d2byrf_ :   (MET126)  (PHE204)   [view usage] : b.96.1.0 |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |automated matches |automated matches |California sea hare (Aplysia californica) [TaxId: 6500]
 d2wzyc_ :   (MET126)  (PHE204)   [view usage] : b.96.1.0 |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |automated matches |automated matches |California sea hare (Aplysia californica) [TaxId: 6500]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.96