Tableau information
Concept source: d1xaua_ amino acid (a.a.) range (VAL13)(PRO84)
nSSEs in this Concept: 6
String of secondary struct.elems. (SSEs) defining this concept: EEEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(VAL13) (ILE17) E1
(ASN20) (TRP26) E2
(LEU30) (CYS40) E3
(HIS42) (HIS51) E4
(TYR66) (GLU71) E5
(VAL75) (PRO84) E6
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 53.1° E2
E3 152.5° 151.0° E3
E4 -35.1° -68.8° 138.7° E4
E5 114.9° 121.7° -48.4° 138.7° E5
E6 -43.3° -33.8° 159.9° -38.9° 151.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4iuga5 : (GLY888) (PRO946) [view usage] : b.18.1.0 |Galactose-binding domain-like |Galactose-binding domain-like |automated matches |automated matches |Fungus (Aspergillus oryzae) [TaxId: 5062]
d1cd9d1 : (PRO4) (PRO71) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Granulocyte colony-stimulating factor (GC-SF) receptor |Mouse (Mus musculus) [TaxId: 10090]
d1koaa1 : (GLN6265) (ILE6325) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Twitchin |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d4cmma_ : (GLU3) (ASN80) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2jjtb_ : (GLU3) (ASN80) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3bpnb1 : (PRO0) (ASP66) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ae6h2 : (LYS115) (VAL181) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Mouse (Mus musculus) [TaxId: 10090]
d2y6th_ : (ARG78) (ALA159) [view usage] : b.16.1.1 |Ecotin, trypsin inhibitor |Ecotin, trypsin inhibitor |Ecotin, trypsin inhibitor |automated matches |Yersinia pseudotuberculosis [TaxId: 502800]
d4lxoa1 : (GLY1326) (ASN1386) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3ry5a2 : (TRP90) (ILE141) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4bboc_ : (GLN45) (PHE111) [view usage] : b.61.1.0 |Streptavidin-like |Avidin/streptavidin |automated matches |automated matches |Bradyrhizobium japonicum [TaxId: 375]
d3bn3b2 : (ASP90) (THR153) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1f6ab2 : (PRO439) (GLU510) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain epsilon constant domain 4, CH4-epsilon |Human (Homo sapiens) [TaxId: 9606]
d2a2ga_ : (ARG39) (ILE92) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |Major urinary protein/alpha-2u-globulin |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2aw2a1 : (VAL36) (ILE99) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |B- and T-lymphocyte attenuator CD272 |Human (Homo sapiens) [TaxId: 9606]
d2c9aa1 : (ARG184) (ASN246) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Receptor-type tyrosine-protein phosphatase mu |Human (Homo sapiens) [TaxId: 9606]
d1bqua1 : (PRO7) (TYR68) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Cytokine receptor gp130 cytokine-binding domains |Human (Homo sapiens) [TaxId: 9606]
d1efxd1 : (ARG6) (SER65) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Killer cell inhibitory receptor |Human (Homo sapiens), kir2dl3 [TaxId: 9606]
d2x40a3 : (THR601) (PRO675) [view usage] : b.1.31.0 |Immunoglobulin-like beta-sandwich |Fibronectin III-like |automated matches |automated matches |Thermotoga neapolitana [TaxId: 309803]
d1xaua_ : (VAL13) (PRO84) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |B and T lymphocyte attenuator, Btla |Mouse (Mus musculus) [TaxId: 10090]
d2jqma_ : (LYS303) (LEU364) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Yellow fever virus
d1tnfa_ : (PRO12) (SER99) [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |Tumor necrosis factor (TNF) |Human (Homo sapiens) [TaxId: 9606]
d1hxma2 : (PRO123) (GLY181) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |T-cell antigen receptor |Human (Homo sapiens), gamma-chain [TaxId: 9606]
d3og2a2 : (ALA398) (THR466) [view usage] : b.71.1.0 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |automated matches |automated matches |Trichoderma reesei [TaxId: 51453]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.60, b.18, b.1, b.22, b.61, b.71, b.16