Tableau information
Concept source: d1nezh_ amino acid (a.a.) range (PRO5)(SER59)
nSSEs in this Concept: 6
String of secondary struct.elems. (SSEs) defining this concept: EEEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO5) (PRO11) E1
(LYS12) (ALA16) E2
(GLN20) (GLY30) E3
(GLY35) (ASN42) E4
(PRO48) (PHE52) E5
(VAL53) (SER59) E6
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 33.7° E2
E3 160.0° -164.8° E3
E4 -49.7° -54.0° 134.8° E4
E5 101.7° 87.3° -81.9° 141.0° E5
E6 126.3° 128.3° -45.6° 171.4° -43.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.2° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1nakh1 : (GLU1) (SER54) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 7.2 [TaxId: 10090]
d1cf1d1 : (SER21) (GLN89) [view usage] : b.1.18.11 |Immunoglobulin-like beta-sandwich |E set domains |Arrestin/Vps26-like |Arrestin |Cow (Bos taurus), visual arrestin [TaxId: 9913]
d1dqmh1 : (VAL2) (SER54) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 7.2 [TaxId: 10090]
d3umta2 : (ASP138) (ALA187) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3bx7c_ : (MET3) (THR53) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3et9f1 : (ILE2) (TYR50) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1yeeh1 : (VAL2) (GLY53) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]
d1kn2h1 : (MET2) (GLY53) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]
d3abza4 : (THR721) (HIS781) [view usage] : b.1.31.1 |Immunoglobulin-like beta-sandwich |Fibronectin III-like |Fibronectin III-like |Beta-glucosidase C-terminal domain |Kluyveromyces marxianus [TaxId: 4911]
d2ic2b_ : (ARG508) (GLY573) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Hedgehog receptor iHog |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1ayrb2 : (LEU203) (GLN265) [view usage] : b.1.18.11 |Immunoglobulin-like beta-sandwich |E set domains |Arrestin/Vps26-like |Arrestin |Cow (Bos taurus), visual arrestin [TaxId: 9913]
d1ayra2 : (LEU203) (PRO270) [view usage] : b.1.18.11 |Immunoglobulin-like beta-sandwich |E set domains |Arrestin/Vps26-like |Arrestin |Cow (Bos taurus), visual arrestin [TaxId: 9913]
d1pg7w1 : (GLN1) (GLY50) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin light chain lambda variable domain, VL-lambda |Mouse (Mus musculus) [TaxId: 10090]
d3p2da1 : (LYS18) (GLN86) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Cow (Bos taurus) [TaxId: 9913]
d1nbqb1 : (GLY27) (ASN76) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Junction adhesion molecule, JAM, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1bqhg_ : (PRO5) (SER59) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |CD8 |Mouse (Mus musculus) [TaxId: 10090]
d2z8vc_ : (ALA1) (ASN60) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Spotted wobbegong (Orectolobus maculatus) [TaxId: 168098]
d4qo1a_ : (GLN4) (ASN53) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Llama (Lama glama) [TaxId: 9844]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.1