Protein Concepts Dictionary

Tableau information

Concept source:  d1rqib_  amino acid (a.a.) range (ASP220)(ARG318)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: HHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASP220)  (ASP248) H1
	  (ASP252)  (GLY257) H2
	  (GLY261)  (GLY267) H3
	  (LEU277)  (SER302) H4
	  (THR305)  (ARG318) H5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                 
H2     -148.5°   H2                          
H3      -74.9°  -99.7°   H3                   
H4     -163.7°   33.2°  120.9°   H4            
H5       15.4° -145.2°  -59.5°  177.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1jr3d1 :   (PRO243)  (LEU331)   [view usage] : a.80.1.1 |post-AAA+ oligomerization domain-like |post-AAA+ oligomerization domain-like |DNA polymerase III clamp loader subunits, C-terminal domain |delta subunit |Escherichia coli [TaxId: 562]
 d1rqib_ :   (ASP220)  (ARG318)   [view usage] : a.128.1.1 |Terpenoid synthases |Terpenoid synthases |Isoprenyl diphosphate synthases |Farnesyl diphosphate synthase (geranyltranstransferase) |Escherichia coli [TaxId: 562]
 d1rqia_ :   (ASP220)  (ARG318)   [view usage] : a.128.1.1 |Terpenoid synthases |Terpenoid synthases |Isoprenyl diphosphate synthases |Farnesyl diphosphate synthase (geranyltranstransferase) |Escherichia coli [TaxId: 562]
 d1rqja_ :   (ASP220)  (ARG318)   [view usage] : a.128.1.1 |Terpenoid synthases |Terpenoid synthases |Isoprenyl diphosphate synthases |Farnesyl diphosphate synthase (geranyltranstransferase) |Escherichia coli [TaxId: 562]
 d4llsa_ :   (ALA199)  (ARG286)   [view usage] : a.128.1.0 |Terpenoid synthases |Terpenoid synthases |automated matches |automated matches |Roseobacter denitrificans [TaxId: 375451]
 d4llsb_ :   (ALA199)  (ARG286)   [view usage] : a.128.1.0 |Terpenoid synthases |Terpenoid synthases |automated matches |automated matches |Roseobacter denitrificans [TaxId: 375451]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.128,    a.80