Tableau information
Concept source: d1umnd_ amino acid (a.a.) range (LEU22)(GLY167)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LEU22) (TRP48) H1
(GLY54) (GLY84) H2
(THR90) (GLU96) H3
(THR110) (GLY140) H4
(SER142) (GLY167) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -159.5° H2
H3 -99.3° 99.7° H3
H4 -168.8° 19.0° 88.6° H4
H5 28.1° -167.7° -71.3° -158.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2yjje_ : (GLU16) (LEU155) [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Microbacterium arborescens [TaxId: 33883]
d1dpsb_ : (SER22) (ILE166) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Dodecameric ferritin homolog |Escherichia coli, Dps [TaxId: 562]
d1vela_ : (SER10) (GLU157) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Dodecameric ferritin homolog |Mycobacterium smegmatis [TaxId: 1772]
d1n1qd_ : (LEU8) (GLU149) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Dodecameric ferritin homolog |Bacillus brevis, Dps [TaxId: 1393]
d2cf7e_ : (ASP24) (GLY167) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Streptococcus suis [TaxId: 1307]
d1umng_ : (SER25) (GLY167) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Dodecameric ferritin homolog |Streptococcus suis [TaxId: 1307]
d1jiga_ : (LYS4) (LYS147) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Dodecameric ferritin homolog |Bacillus anthracis, Dlp-2 [TaxId: 1392]
d2yjjd_ : (GLU16) (LEU155) [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Microbacterium arborescens [TaxId: 33883]
d2bjyb_ : (ASP8) (GLY151) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Listeria innocua [TaxId: 1642]
d1jrea_ : (SER22) (ILE166) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Dodecameric ferritin homolog |Escherichia coli, Dps [TaxId: 562]
d2ux1e_ : (SER25) (GLY167) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Dodecameric ferritin homolog |Streptococcus suis [TaxId: 1307]
d2fjca1 : (ALA29) (LEU175) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Dodecameric ferritin homolog |Treponema pallidum, TpF1 [TaxId: 160]
d2cf7b_ : (ASP24) (GLY167) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Streptococcus suis [TaxId: 1307]
d1umni_ : (ASP24) (GLY167) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Dodecameric ferritin homolog |Streptococcus suis [TaxId: 1307]
d1dpsa_ : (SER22) (ILE166) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Dodecameric ferritin homolog |Escherichia coli, Dps [TaxId: 562]
d1umnd_ : (LEU22) (GLY167) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Dodecameric ferritin homolog |Streptococcus suis [TaxId: 1307]
d1dpsd_ : (SER22) (ILE166) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Dodecameric ferritin homolog |Escherichia coli, Dps [TaxId: 562]
d2fjcb_ : (ASP28) (LEU175) [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Treponema pallidum [TaxId: 160]
d2yjjb_ : (PRO15) (LEU155) [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Microbacterium arborescens [TaxId: 33883]
d3ak8b_ : (SER22) (ILE166) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Salmonella enterica [TaxId: 439842]
d3ak8f_ : (SER22) (ILE166) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Salmonella enterica [TaxId: 439842]
d3iq1b_ : (THR10) (LYS156) [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Vibrio cholerae [TaxId: 243277]
d2ux1g_ : (LEU36) (GLY167) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Dodecameric ferritin homolog |Streptococcus suis [TaxId: 1307]
d1qgha_ : (THR9) (GLY151) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Dodecameric ferritin homolog |Listeria innocua [TaxId: 1642]
d2yjkb_ : (GLU13) (LEU152) [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Microbacterium arborescens [TaxId: 33883]
d2gyqa1 : (THR10) (THR156) [view usage] : a.25.1.4 |Ferritin-like |Ferritin-like |YciF-like |Hypothetical ptotein RPA3308 |Rhodopseudomonas palustris [TaxId: 1076]
d1o9rd_ : (PRO11) (GLN159) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Dodecameric ferritin homolog |Agrobacterium tumefaciens, Dps [TaxId: 358]
d2iy4a_ : (SER6) (GLY151) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Listeria monocytogenes [TaxId: 1639]
d3ak8a_ : (SER22) (ILE166) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Salmonella enterica [TaxId: 439842]
d2yjkg_ : (GLU13) (LEU152) [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Microbacterium arborescens [TaxId: 33883]
d3iq1c_ : (THR10) (LYS156) [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Vibrio cholerae [TaxId: 243277]
d1n1qa_ : (THR3) (GLU149) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Dodecameric ferritin homolog |Bacillus brevis, Dps [TaxId: 1393]
d4m33b_ : (PRO17) (VAL125) [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
d3kwoa_ : (THR4) (GLN144) [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]
d4evba_ : (LYS2) (LEU143) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Dodecameric ferritin homolog |Helicobacter pylori, Nap [TaxId: 210]
d4dyud_ : (GLU22) (ILE166) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Yersinia pestis [TaxId: 187410]
d2j9ba_ : (PRO5) (PHE126) [view usage] : a.24.3.2 |Four-helical up-and-down bundle |Cytochromes |Cytochrome c'-like |automated matches |Rhodocyclus gelatinosus [TaxId: 28068]
d2d5kc_ : (GLN5) (SER148) [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 93062]
d1o9rc_ : (PRO11) (GLN159) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Dodecameric ferritin homolog |Agrobacterium tumefaciens, Dps [TaxId: 358]
d1n1qc_ : (LEU8) (GLU149) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Dodecameric ferritin homolog |Bacillus brevis, Dps [TaxId: 1393]
d2d5ka_ : (GLN5) (SER148) [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 93062]
d1jrec_ : (SER22) (ILE166) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Dodecameric ferritin homolog |Escherichia coli, Dps [TaxId: 562]
d2bk6c_ : (THR9) (GLY151) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Listeria innocua [TaxId: 1642]
d3kwob_ : (THR4) (ALA125) [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]
d2fjcc_ : (ALA29) (THR174) [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Treponema pallidum [TaxId: 160]
d2cf7g_ : (LEU22) (GLY167) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Streptococcus suis [TaxId: 1307]
d2bkcr_ : (LEU20) (GLY151) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Listeria innocua [TaxId: 1642]
d1umna_ : (LEU22) (GLY167) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Dodecameric ferritin homolog |Streptococcus suis [TaxId: 1307]
d2gs4a1 : (THR5) (ASN159) [view usage] : a.25.1.4 |Ferritin-like |Ferritin-like |YciF-like |Hypothetical protein YciF |Escherichia coli [TaxId: 562]
d1ji5a_ : (VAL5) (ASN145) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Dodecameric ferritin homolog |Bacillus anthracis, Dlp-1 [TaxId: 1392]
d2xjnc_ : (ASP24) (GLY167) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Dodecameric ferritin homolog |Streptococcus suis [TaxId: 1307]
d2yjja_ : (PRO15) (LEU155) [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Microbacterium arborescens [TaxId: 33883]
d2chpa_ : (ALA6) (GLY153) [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d2bjya1 : (THR9) (GLY151) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Dodecameric ferritin homolog |Listeria innocua [TaxId: 1642]
d2pyba_ : (ASP14) (LEU156) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Dodecameric ferritin homolog |Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]
d2bjyl_ : (ASP8) (GLY151) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Listeria innocua [TaxId: 1642]
d1f33f_ : (SER22) (ILE166) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Dodecameric ferritin homolog |Escherichia coli, Dps [TaxId: 562]
d2yjjh_ : (GLU16) (LEU155) [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Microbacterium arborescens [TaxId: 33883]
d2iy4u_ : (ASP8) (GLY151) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Listeria monocytogenes [TaxId: 1639]
d2gs4b_ : (ILE6) (ASN157) [view usage] : a.25.1.4 |Ferritin-like |Ferritin-like |YciF-like |Hypothetical protein YciF |Escherichia coli [TaxId: 562]
d1uvha_ : (LYS12) (GLU157) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Mycobacterium smegmatis [TaxId: 1772]
d2f7na_ : (GLU54) (ASP202) [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Deinococcus radiodurans [TaxId: 1299]
d1f30a_ : (PHE40) (ILE166) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Dodecameric ferritin homolog |Escherichia coli, Dps [TaxId: 562]
d2cf7c_ : (ASP24) (GLY167) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Streptococcus suis [TaxId: 1307]
d4evda_ : (LYS2) (ALA144) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Dodecameric ferritin homolog |Helicobacter pylori, Nap [TaxId: 210]
d4dyuh_ : (GLU22) (ILE166) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Yersinia pestis [TaxId: 187410]
d1k0mb1 : (ASN100) (TYR194) [view usage] : a.45.1.1 |GST C-terminal domain-like |GST C-terminal domain-like |Glutathione S-transferase (GST), C-terminal domain |Chloride intracellular channel 1 (clic1) |Human (Homo sapiens) [TaxId: 9606]
d3kwod_ : (SER2) (GLN144) [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]
d2yjjg_ : (PRO15) (LEU155) [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Microbacterium arborescens [TaxId: 33883]
d2d5kb_ : (GLN5) (SER148) [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 93062]
d2bjyh_ : (THR9) (GLY151) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Listeria innocua [TaxId: 1642]
d4dyub_ : (THR29) (ILE166) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Yersinia pestis [TaxId: 187410]
d1jree_ : (SER22) (ILE166) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Dodecameric ferritin homolog |Escherichia coli, Dps [TaxId: 562]
d4dyua_ : (THR29) (ILE166) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Yersinia pestis [TaxId: 187410]
d3iq1a_ : (THR10) (LYS156) [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Vibrio cholerae [TaxId: 243277]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
a.25, a.45, a.24