Protein Concepts Dictionary

Tableau information

Concept source:  d4cimb_  amino acid (a.a.) range (ALA75)(LEU150)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: HHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ALA75)   (PHE87) H1
	   (ASN92)  (GLU114) H2
	  (MET115)  (ALA135) H3
	  (ALA135)  (GLY142) H4
	  (TRP144)  (LEU150) H5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                 
H2      160.0°   H2                          
H3      -34.9°  164.0°   H3                   
H4       36.9° -139.1°  -54.2°   H4            
H5       66.9°  -93.7°  101.8°   64.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.8°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1g5ja_ :   (THR119)  (GLY200)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |Apoptosis regulator Bcl-xL |Human (Homo sapiens) [TaxId: 9606]
 d4c52a_ :   (ALA119)  (LEU194)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4cimb_ :    (ALA75)  (LEU150)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3kj0a_ :   (SER247)  (HIS320)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2kbwa_ :   (ASP242)  (PHE319)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4hw2b_ :   (SER247)  (HIS320)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4cina_ :   (PHE131)  (LEU194)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1jwea_ :    (VAL55)  (LYS110)   [view usage] : a.81.1.1 |N-terminal domain of DnaB helicase |N-terminal domain of DnaB helicase |N-terminal domain of DnaB helicase |N-terminal domain of DnaB helicase |Escherichia coli [TaxId: 562]
 d4tuha_ :   (TYR120)  (LEU194)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |Apoptosis regulator Bcl-xL |Human (Homo sapiens) [TaxId: 9606]
 d3fdla_ :   (ALA119)  (LEU194)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4tuhf_ :   (GLN121)  (LEU194)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |Apoptosis regulator Bcl-xL |Human (Homo sapiens) [TaxId: 9606]
 d3fdma_ :   (ALA119)  (LEU194)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4oq5b_ :   (SER247)  (PHE319)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4hw3d_ :   (SER247)  (PHE318)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4cima_ :    (ALA75)  (LEU150)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   f.1,    a.81