Protein Concepts Dictionary

Tableau information

Concept source:  d1qgja_  amino acid (a.a.) range (ASN227)(ILE283)

nSSEs in this Concept: 5

String of secondary struct.elems. (SSEs) defining this concept: HHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASN227)  (GLY235) H1
	  (LEU239)  (ILE244) H2
	  (ILE244)  (SER248) H3
	  (THR255)  (SER265) H4
	  (GLN266)  (ILE283) H5

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                 
H2      -77.0°   H2                          
H3      -37.3°  -44.8°   H3                   
H4     -127.7°  -93.6° -130.9°   H4            
H5      106.4°  122.4°  105.6° -121.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1qgja_ :   (ASN227)  (ILE283)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Plant peroxidase |Thale cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]
 d1atja_ :   (LYS232)  (ASN286)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Plant peroxidase |Horseradish (Armoracia rusticana) [TaxId: 3704]
 d3rmbc2 :   (VAL470)  (ASN572)   [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |Family B DNA polymerase |Bacteriophage RB69 [TaxId: 12353]
 d2ylja_ :   (LYS232)  (ASN286)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Plant peroxidase |Horseradish (Armoracia rusticana) [TaxId: 3704]
 d1gw2a_ :   (LYS232)  (ASN286)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Plant peroxidase |Horseradish (Armoracia rusticana) [TaxId: 3704]
 d1gwua_ :   (LYS232)  (ASN286)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Plant peroxidase |Horseradish (Armoracia rusticana) [TaxId: 3704]
 d7atja_ :   (LYS232)  (ASN286)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Plant peroxidase |Horseradish (Armoracia rusticana) [TaxId: 3704]
 d1gwoa_ :   (LYS232)  (ASN286)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Plant peroxidase |Horseradish (Armoracia rusticana) [TaxId: 3704]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   e.8,    a.93