Tableau information
Concept source: d4icba_ amino acid (a.a.) range (SER2)(VAL70)
nSSEs in this Concept: 5
String of secondary struct.elems. (SSEs) defining this concept: HHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER2) (ALA14) H1
(SER24) (PRO37) H2
(PRO37) (GLY42) H3
(THR45) (LEU53) H4
(SER62) (VAL70) H5
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 132.4° H2
H3 -77.4° -108.7° H3
H4 -114.1° 110.4° 102.4° H4
H5 124.5° -33.0° 75.7° 118.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3mw6e_ : (THR2) (ARG74) [view usage] : a.136.1.1 |FinO-like |FinO-like |FinO-like |Hypothetical protein NMB1681 |Neisseria meningitidis [TaxId: 487]
d1e8aa_ : (THR1) (TYR86) [view usage] : a.39.1.2 |EF Hand-like |EF-hand |S100 proteins |Calcyclin (S100) |Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]
d3gkxa_ : (TRP46) (THR88) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Bacteroides fragilis [TaxId: 272559]
d1k96a_ : (LEU5) (GLY90) [view usage] : a.39.1.2 |EF Hand-like |EF-hand |S100 proteins |Calcyclin (S100) |Human (Homo sapiens), s100a6 [TaxId: 9606]
d3gpba_ : (VAL715) (PRO794) [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Glycogen phosphorylase |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d1mq1a_ : (GLU2) (CYS84) [view usage] : a.39.1.2 |EF Hand-like |EF-hand |S100 proteins |Calcyclin (S100) |Human (Homo sapiens), s100b [TaxId: 9606]
d1l5va_ : (THR679) (GLN761) [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Maltodextrin phosphorylase (MALP) |Escherichia coli [TaxId: 562]
d1a4pb_ : (SER2) (HIS89) [view usage] : a.39.1.2 |EF Hand-like |EF-hand |S100 proteins |Calcyclin (S100) |Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
d1noia_ : (ARG714) (PRO794) [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Glycogen phosphorylase |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d1qana_ : (LYS188) (ASN243) [view usage] : c.66.1.24 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |rRNA adenine dimethylase-like |rRNA adenine dimethylase |Bacillus subtilis, Ermc' [TaxId: 1423]
d2m3sa_ : (SER84) (LYS151) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calmodulin |Chicken (Gallus gallus) [TaxId: 9031]
d2c35e_ : (ASN76) (THR136) [view usage] : a.60.8.2 |SAM domain-like |HRDC-like |RNA polymerase II subunit RBP4 (RpoF) |RNA polymerase II subunit RBP4 (RpoF) |Human (Homo sapiens) [TaxId: 9606]
d1a4pa_ : (SER2) (MET90) [view usage] : a.39.1.2 |EF Hand-like |EF-hand |S100 proteins |Calcyclin (S100) |Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
d2joja_ : (SER26) (ASN99) [view usage] : a.39.1.0 |EF Hand-like |EF-hand |automated matches |automated matches |Euplotes octocarinatus [TaxId: 5937]
d4icba_ : (SER2) (VAL70) [view usage] : a.39.1.1 |EF Hand-like |EF-hand |Calbindin D9K |Calbindin D9K |Cow (Bos taurus) [TaxId: 9913]
d2le9b_ : (THR7) (ILE95) [view usage] : a.39.1.0 |EF Hand-like |EF-hand |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3l2db1 : (LYS18) (ILE68) [view usage] : a.83.1.0 |Guanido kinase N-terminal domain |Guanido kinase N-terminal domain |automated matches |automated matches |Namalycastis sp. [TaxId: 243920]
d2egda_ : (LEU9) (LYS89) [view usage] : a.39.1.2 |EF Hand-like |EF-hand |S100 proteins |Calcyclin (S100) |Human (Homo sapiens), s100a13 [TaxId: 9606]
d1broa_ : (GLN142) (TYR206) [view usage] : c.69.1.12 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloperoxidase |Bromoperoxidase A2 |Streptomyces aureofaciens [TaxId: 1894]
d2rgib_ : (LEU5) (MET85) [view usage] : a.39.1.2 |EF Hand-like |EF-hand |S100 proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2ki4b_ : (THR7) (LYS90) [view usage] : a.39.1.0 |EF Hand-like |EF-hand |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1cfja_ : (ASN324) (VAL395) [view usage] : c.69.1.1 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Acetylcholinesterase-like |Acetylcholinesterase |Pacific electric ray (Torpedo californica) [TaxId: 7787]
d2lvia_ : (MET4) (SER61) [view usage] : a.39.1.10 |EF Hand-like |EF-hand |Polcalcin |Polcalcin phl p 7 |Timothy grass (Phleum pratense) [TaxId: 15957]
d2egdb_ : (THR7) (ASP92) [view usage] : a.39.1.2 |EF Hand-like |EF-hand |S100 proteins |Calcyclin (S100) |Human (Homo sapiens), s100a13 [TaxId: 9606]
d3drea1 : (ASN5) (ILE57) [view usage] : a.83.1.0 |Guanido kinase N-terminal domain |Guanido kinase N-terminal domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2mjwb_ : (GLU3) (ALA92) [view usage] : a.39.1.2 |EF Hand-like |EF-hand |S100 proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2ecpa_ : (THR714) (GLN794) [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Maltodextrin phosphorylase (MALP) |Escherichia coli [TaxId: 562]
d1qlsa_ : (THR6) (THR97) [view usage] : a.39.1.2 |EF Hand-like |EF-hand |S100 proteins |Calcyclin (S100) |Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]
d3mw6c_ : (ALA6) (CYS72) [view usage] : a.136.1.1 |FinO-like |FinO-like |FinO-like |Hypothetical protein NMB1681 |Neisseria meningitidis [TaxId: 487]
d1kqva_ : (SER2) (GLN67) [view usage] : a.39.1.1 |EF Hand-like |EF-hand |Calbindin D9K |Calbindin D9K |Cow (Bos taurus) [TaxId: 9913]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.69, c.66, c.47, c.87, a.39, a.83, a.60, a.136